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comparison maker.xml @ 8:d3b3de98c481 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/maker commit 90ae29b39b58999e45a8f4e0bfbabc5a59047ba1"
author iuc
date Mon, 28 Jun 2021 09:38:50 +0000
parents 10e2edf1e1fb
children 388d33fce1b9
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7:10e2edf1e1fb 8:d3b3de98c481
392 <option value="schistosoma2">schistosoma2</option> 392 <option value="schistosoma2">schistosoma2</option>
393 <option value="sulfolobus_solfataricus">sulfolobus_solfataricus</option> 393 <option value="sulfolobus_solfataricus">sulfolobus_solfataricus</option>
394 </param> 394 </param>
395 </when> 395 </when>
396 </conditional> 396 </conditional>
397 <param name="unmask" type="boolean" truevalue="1" falsevalue="0" checked="false" label="Run ab-initio prediction programs on unmasked sequence" help="Predictors will look for genes in repeated elements (like transposons). Only useful when you believe that transposons might have been integrated into a real gene structure (rare)."/> 397 <param name="unmask" type="boolean" truevalue="1" falsevalue="0" checked="false" label="Run ab-initio prediction programs on both masked and unmasked sequence regions" help="Predictors will look for genes in both masked or unmasked sequence regions (instead of only unmasked). Only useful when you believe that transposons might have been integrated into a real gene structure (rare)."/>
398 </section> 398 </section>
399 399
400 <section name="repeat_masking" title="Repeat masking" expanded="True"> 400 <section name="repeat_masking" title="Repeat masking" expanded="True">
401 <conditional name="repeat_source"> 401 <conditional name="repeat_source">
402 <param label="Repeat library source" name="source_type" type="select" help="To use RepBase, choose 'Custom library of repeats' and select a fasta version of this non-free database."> 402 <param label="Repeat library source" name="source_type" type="select" help="To use RepBase, choose 'Custom library of repeats' and select a fasta version of this non-free database.">