Mercurial > repos > iuc > magicblast

comparison magicblast.xml @ 2:c02930677dc7 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/blast commit e737cae558b4758afdb6758807b5f19f8b6ea38e
author iuc
date Mon, 31 Oct 2022 20:12:36 +0000
parents 3db0c572fb04
children
comparison
equal deleted inserted replaced
1:3db0c572fb04 2:c02930677dc7
315 <param name="query_mate" value="query_reverse1.fastqsanger.gz" ftype="fastqsanger.gz"/> 315 <param name="query_mate" value="query_reverse1.fastqsanger.gz" ftype="fastqsanger.gz"/>
316 <param name="db_opts_selector" value="file"/> 316 <param name="db_opts_selector" value="file"/>
317 <param name="subject" value="subject1.fasta.gz" ftype="fasta.gz"/> 317 <param name="subject" value="subject1.fasta.gz" ftype="fasta.gz"/>
318 <output name="output" ftype="bam"> 318 <output name="output" ftype="bam">
319 <assert_contents> 319 <assert_contents>
320 <has_size value="62080" delta="50"/> 320 <has_size value="61454" delta="50"/>
321 </assert_contents> 321 </assert_contents>
322 </output> 322 </output>
323 </test> 323 </test>
324 <!-- Paired fastqsanger.gz input, cached blast db --> 324 <!-- Paired fastqsanger.gz input, cached blast db -->
325 <test expect_num_outputs="1"> 325 <test expect_num_outputs="1">
327 <param name="query_mate" value="query_reverse1.fastqsanger.gz" ftype="fastqsanger.gz"/> 327 <param name="query_mate" value="query_reverse1.fastqsanger.gz" ftype="fastqsanger.gz"/>
328 <param name="db_opts_selector" value="db"/> 328 <param name="db_opts_selector" value="db"/>
329 <param name="database" value="phiX174"/> 329 <param name="database" value="phiX174"/>
330 <output name="output" ftype="bam"> 330 <output name="output" ftype="bam">
331 <assert_contents> 331 <assert_contents>
332 <has_size value="62079" delta="50"/> 332 <has_size value="61457" delta="50"/>
333 </assert_contents> 333 </assert_contents>
334 </output> 334 </output>
335 </test> 335 </test>
336 </tests> 336 </tests>
337 <help><![CDATA[ 337 <help><![CDATA[