Mercurial > repos > iuc > macs2

diff macs2_bdgpeakcall.xml @ 53:8f6b37d29df5 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/macs2 commit 586ecaebf9e6020fac2674fbda368e293d1c9bc2
author: iuc
date: Thu, 25 Jan 2018 02:11:22 -0500
parents: 1b3f899ef044
children: 1ac88e46ee0f
--- a/macs2_bdgpeakcall.xml	Wed Dec 27 10:17:42 2017 -0500
+++ b/macs2_bdgpeakcall.xml	Thu Jan 25 02:11:22 2018 -0500
@@ -6,9 +6,8 @@
     <expand macro="requirements"/>
     <expand macro="stdio" />
     <expand macro="version_command" />
-    <command>
-        <![CDATA[
-
+    <command><![CDATA[
+        @home_dir@
         macs2 bdgpeakcall
         --ifile '${ infile }'
         --cutoff '${ cutoff }'
@@ -17,9 +16,7 @@
         ${ cutoff_analysis } 
         ${ notrackline }
         --ofile '${ outfile }'
-
-        ]]>
-    </command>
+    ]]></command>
     <inputs>
         <param name="infile" type="data" format="bedgraph" label="MACS score in bedGraph" />
         <param name="cutoff" type="float" label="Cutoff for peaks" value="5.0"