Mercurial > repos > iuc > macs2

diff macs2_bdgcmp.xml @ 53:8f6b37d29df5 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/macs2 commit 586ecaebf9e6020fac2674fbda368e293d1c9bc2
author iuc
date Thu, 25 Jan 2018 02:11:22 -0500
parents 1b3f899ef044
children 1ac88e46ee0f
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line diff
--- a/macs2_bdgcmp.xml	Wed Dec 27 10:17:42 2017 -0500
+++ b/macs2_bdgcmp.xml	Thu Jan 25 02:11:22 2018 -0500
@@ -6,8 +6,8 @@
     <expand macro="requirements" />
     <expand macro="stdio" />
     <expand macro="version_command" />
-    <command>
-        <![CDATA[
+    <command><![CDATA[
+        @home_dir@
         macs2 bdgcmp
             -t '${ infile_treatment }'
             -c '${ infile_control }'
@@ -17,8 +17,7 @@
                 -p '${ bdgcmp_options.pseudocount }'
             #end if
             -o '${ outfile }'
-        ]]>
-    </command>
+    ]]></command>
     <inputs>
         <param name="infile_treatment" type="data" format="bedgraph" label="Treatment bedGraph file" />
         <param name="infile_control" type="data" format="bedgraph" label="Control bedGraph file" />