comparison tool_dependencies.xml @ 15:d89001e78ee4 draft

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author bgruening
date Fri, 24 Jan 2014 11:18:29 -0500
parents 50f87b0c55bd
children d9a0a017896a
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14:50f87b0c55bd 15:d89001e78ee4
15 <!-- 2.0.10 12162013 --> 15 <!-- 2.0.10 12162013 -->
16 <package name="macs2" version="2.0.10.3"> 16 <package name="macs2" version="2.0.10.3">
17 <install version="1.0"> 17 <install version="1.0">
18 <actions> 18 <actions>
19 <action type="shell_command">git clone --recursive https://github.com/taoliu/MACS.git</action> 19 <action type="shell_command">git clone --recursive https://github.com/taoliu/MACS.git</action>
20 <!-- Galaxy tries to change automatically to the directory "macs2" (name of the package).
21 But we need to change to MACS. Go one level back and enter MACS -->
20 <action type="change_directory">../MACS</action> 22 <action type="change_directory">../MACS</action>
21 <action type="shell_command">git checkout 7ccb571d2f2dcb5be1d75f323b1d17a59b926deb</action> 23 <action type="shell_command">git checkout 7ccb571d2f2dcb5be1d75f323b1d17a59b926deb</action>
22 <action type="shell_command">git submodule update --recursive</action> 24 <action type="shell_command">git submodule update --recursive</action>
23 25
24 <action type="set_environment_for_install"> 26 <action type="set_environment_for_install">