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annotate test-data/NC_045512.2_annot.gff3 @ 0:5e8505f27681 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
author iuc
date Tue, 08 Aug 2023 15:11:47 +0000
parents
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5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
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diff changeset
1 ##sequence-region NC_045512.2 1 29903
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
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2 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2697049
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
parents:
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3 NC_045512.2 Giorgi CDS 266 805 . + . NSP1 Leader protein
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
parents:
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4 NC_045512.2 Giorgi CDS 806 2719 . + . NSP2 Non-Structural protein 2
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
parents:
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5 NC_045512.2 Giorgi CDS 2720 8554 . + . NSP3 Predicted phosphoesterase, papain-like proteinase
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
parents:
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6 NC_045512.2 Giorgi CDS 8555 10054 . + . NSP4 Transmembrane protein
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
parents:
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7 NC_045512.2 Giorgi CDS 10055 10972 . + . NSP5 3C-like proteinase
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
parents:
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8 NC_045512.2 Giorgi CDS 10973 11842 . + . NSP6 Transmembrane protein
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
parents:
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9 NC_045512.2 Giorgi CDS 11843 12091 . + . NSP7 Non-Structural Protein 7
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
parents:
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10 NC_045512.2 Giorgi CDS 12092 12685 . + . NSP8 Non-Structural Protein 8
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
parents:
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11 NC_045512.2 Giorgi CDS 12686 13024 . + . NSP9 ssRNA-binding protein
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
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12 NC_045512.2 Giorgi CDS 13025 13441 . + . NSP10 Growth-factor-like protein
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
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13 NC_045512.2 Giorgi CDS 13442 13468 . + . NSP12a RNA-dependent RNA polymerase, pre-ribosomal frameshift
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
parents:
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14 NC_045512.2 Giorgi CDS 13468 16236 . + . NSP12b RNA-dependent RNA polymerase, post-ribosomal frameshift
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
parents:
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15 NC_045512.2 Giorgi CDS 16237 18039 . + . NSP13 Helicase
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
parents:
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16 NC_045512.2 Giorgi CDS 18040 19620 . + . NSP14 3'-to-5' exonuclease
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
parents:
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17 NC_045512.2 Giorgi CDS 19621 20658 . + . NSP15 endoRNAse
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
parents:
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18 NC_045512.2 Giorgi CDS 20659 21552 . + . NSP16 2'-O-ribose methyltransferase
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
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19 NC_045512.2 Giorgi CDS 21563 25384 . + . S Spike
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
parents:
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20 NC_045512.2 Giorgi CDS 25393 26220 . + . ORF3a ORF3a protein
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
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21 NC_045512.2 Giorgi CDS 26245 26472 . + . E Envelope
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
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22 NC_045512.2 Giorgi CDS 26523 27191 . + . M Membrane
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
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23 NC_045512.2 Giorgi CDS 27202 27387 . + . ORF6 ORF6 protein
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
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24 NC_045512.2 Giorgi CDS 27394 27759 . + . ORF7a ORF7a protein
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
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25 NC_045512.2 Giorgi CDS 27756 27887 . + . ORF7b ORF7b protein
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
parents:
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26 NC_045512.2 Giorgi CDS 27894 28259 . + . ORF8 ORF8 protein
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
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27 NC_045512.2 Giorgi CDS 28274 29533 . + . N Nucleocapsid protein
5e8505f27681 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 0bc6ed15054577af1089d55ef9aa1071d122eb6b
iuc
parents:
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28 NC_045512.2 Giorgi CDS 29558 29674 . + . ORF10 ORF10 protein