Mercurial > repos > iuc > length_and_gc_content
diff tool-data/all_fasta.loc.sample @ 1:5f22a5dbc280 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 0a56599c36b4968095ec5a3cb589f94fb139466c
| author | iuc |
|---|---|
| date | Sun, 28 Jan 2018 04:03:49 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/all_fasta.loc.sample Sun Jan 28 04:03:49 2018 -0500 @@ -0,0 +1,18 @@ +#This file lists the locations and dbkeys of all the genome and transcriptome fasta files +#under the "genome" directory (a directory that contains a directory +#for each build. This file has the format (white space characters are +#TAB characters): +# +#<unique_build_id> <dbkey> <display_name> <file_path> +# +#So, all_fasta.loc could look something like this: +# +#apiMel4.5 apiMel4.5 Honeybee (Apis mellifera): apiMel4.5 /path/to/genome/apiMel4.5/apiMel4.5.fa +#hg38canon hg38 Human (Homo sapiens): hg38 Canonical /path/to/genome/hg38/hg38canon.fa +#hg38full hg38 Human (Homo sapiens): hg38 Full /path/to/genome/hg38/hg38full.fa +#hg38full.90 hg38 Human (Homo sapiens): hg38 Full Trans v90 /path/to/genome/hg38/hg38fulltrans.fa + +#Your all_fasta.loc file should contain an entry for each individual +#fasta file. So there will be multiple fasta files for each build, +#such as with hg38 above. +