Mercurial > repos > iuc > length_and_gc_content

annotate tool-data/gene_sets.loc.sample @ 2:03f37e93a3ea draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 7b6b07d22f3e6fed77b2c237de2b0d96fa939711"
author iuc
date Fri, 11 Mar 2022 14:07:42 +0000
parents 5f22a5dbc280
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
5f22a5dbc280 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 0a56599c36b4968095ec5a3cb589f94fb139466c
iuc
parents:
diff changeset
1 # This is a sample file distributed with featureCounts that enables it and other# tools to use gene/exon annotations in the GFF/GTF format.
5f22a5dbc280 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 0a56599c36b4968095ec5a3cb589f94fb139466c
iuc
parents:
diff changeset
2 #
5f22a5dbc280 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 0a56599c36b4968095ec5a3cb589f94fb139466c
iuc
parents:
diff changeset
3 # The gene_sets.loc file syntax is:
5f22a5dbc280 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 0a56599c36b4968095ec5a3cb589f94fb139466c
iuc
parents:
diff changeset
4 #<unique_build_id> <dbkey> <display_name> <path>
5f22a5dbc280 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 0a56599c36b4968095ec5a3cb589f94fb139466c
iuc
parents:
diff changeset
5 #
5f22a5dbc280 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 0a56599c36b4968095ec5a3cb589f94fb139466c
iuc
parents:
diff changeset
6 # Please ensure that the above fields are tab separated.
5f22a5dbc280 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 0a56599c36b4968095ec5a3cb589f94fb139466c
iuc
parents:
diff changeset
7 #
5f22a5dbc280 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 0a56599c36b4968095ec5a3cb589f94fb139466c
iuc
parents:
diff changeset
8 # In case you have TWO or MORE providers PER dbkey, the one mentioned
5f22a5dbc280 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 0a56599c36b4968095ec5a3cb589f94fb139466c
iuc
parents:
diff changeset
9 # first in the file, should have the "default" priority.
5f22a5dbc280 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 0a56599c36b4968095ec5a3cb589f94fb139466c
iuc
parents:
diff changeset
10 #
5f22a5dbc280 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 0a56599c36b4968095ec5a3cb589f94fb139466c
iuc
parents:
diff changeset
11 #Example:
5f22a5dbc280 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 0a56599c36b4968095ec5a3cb589f94fb139466c
iuc
parents:
diff changeset
12 #
5f22a5dbc280 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 0a56599c36b4968095ec5a3cb589f94fb139466c
iuc
parents:
diff changeset
13 #Homo_sapiens.GRCh38.90 hg38 GRCh38 (hg38) annotation from Ensembl, release 90 /depot/data2/galaxy/hg38/gene_sets/Homo_sapiens.GRCh38.90.gtf
5f22a5dbc280 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 0a56599c36b4968095ec5a3cb589f94fb139466c
iuc
parents:
diff changeset
14 #Homo_sapiens.GRCh37.87 hg19 GRCh37 (hg19) annotation from Ensembl, release 87 /depot/data2/galaxy/hg19/gene_sets/Homo_sapiens.GRCh37.87.gtf
5f22a5dbc280 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 0a56599c36b4968095ec5a3cb589f94fb139466c
iuc
parents:
diff changeset
15