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comparison test-data/all_pathways_names.txt @ 0:6e8f61b987b4 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/kegg_pathways_completeness commit 7352c3ea390d3cd3afe19c0af5be59d8cfbaa7cd
author iuc
date Fri, 05 Dec 2025 17:34:15 +0000
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1 M00001:Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
2 M00002:Glycolysis, core module involving three-carbon compounds
3 M00003:Gluconeogenesis, oxaloacetate => fructose-6P
4 M00004:Pentose phosphate pathway (Pentose phosphate cycle)
5 M00005:PRPP biosynthesis, ribose-5P => PRPP
6 M00006:Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P
7 M00007:Pentose phosphate pathway, non-oxidative phase, fructose-6P => ribose-5P
8 M00008:Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
9 M00009:Citrate cycle (TCA cycle, Krebs cycle)
10 M00010:Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
11 M00011:Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
12 M00012:Glyoxylate cycle
13 M00013:Malonate semialdehyde pathway, propanoyl-CoA => acetyl-CoA
14 M00014:Glucuronate pathway (uronate pathway)
15 M00015:Proline biosynthesis, glutamate => proline
16 M00016:Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
17 M00017:Methionine biosynthesis, aspartate => homoserine => methionine
18 M00018:Threonine biosynthesis, aspartate => homoserine => threonine
19 M00019:Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
20 M00020:Serine biosynthesis, glycerate-3P => serine
21 M00021:Cysteine biosynthesis, serine => cysteine
22 M00022:Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
23 M00023:Tryptophan biosynthesis, chorismate => tryptophan
24 M00024:Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
25 M00025:Tyrosine biosynthesis, chorismate => HPP => tyrosine
26 M00026:Histidine biosynthesis, PRPP => histidine
27 M00027:GABA (gamma-Aminobutyrate) shunt
28 M00028:Ornithine biosynthesis, glutamate => ornithine
29 M00029:Urea cycle
30 M00030:Lysine biosynthesis, AAA pathway, 2-oxoglutarate => 2-aminoadipate => lysine
31 M00031:Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine
32 M00032:Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
33 M00033:Ectoine biosynthesis, aspartate => ectoine
34 M00034:Methionine salvage pathway
35 M00035:Methionine degradation
36 M00036:Leucine degradation, leucine => acetoacetate + acetyl-CoA
37 M00037:Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin
38 M00038:Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate
39 M00039:Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
40 M00040:Tyrosine biosynthesis, chorismate => arogenate => tyrosine
41 M00042:Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline
42 M00043:Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine
43 M00044:Tyrosine degradation, tyrosine => homogentisate
44 M00045:Histidine degradation, histidine => N-formiminoglutamate => glutamate
45 M00046:Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate
46 M00047:Creatine pathway
47 M00048:De novo purine biosynthesis, PRPP + glutamine => IMP
48 M00049:Adenine ribonucleotide biosynthesis, IMP => ADP,ATP
49 M00050:Guanine ribonucleotide biosynthesis, IMP => GDP,GTP
50 M00051:De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
51 M00052:Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP
52 M00053:Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
53 M00055:N-glycan precursor biosynthesis
54 M00056:O-glycan biosynthesis, mucin type core
55 M00057:Glycosaminoglycan biosynthesis, linkage tetrasaccharide
56 M00058:Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
57 M00059:Glycosaminoglycan biosynthesis, heparan sulfate backbone
58 M00060:KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
59 M00061:D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde-3P
60 M00063:CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
61 M00064:ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
62 M00065:GPI-anchor biosynthesis, core oligosaccharide
63 M00066:Lactosylceramide biosynthesis
64 M00067:Sulfoglycolipids biosynthesis, ceramide/1-alkyl-2-acylglycerol => sulfatide/seminolipid
65 M00068:Glycosphingolipid biosynthesis, globo-series, LacCer => Gb4Cer
66 M00069:Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3
67 M00070:Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
68 M00071:Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
69 M00072:N-glycosylation by oligosaccharyltransferase
70 M00073:N-glycan precursor trimming
71 M00074:N-glycan biosynthesis, high-mannose type
72 M00075:N-glycan biosynthesis, complex type
73 M00076:Dermatan sulfate degradation
74 M00077:Chondroitin sulfate degradation
75 M00078:Heparan sulfate degradation
76 M00079:Keratan sulfate degradation
77 M00081:Pectin degradation
78 M00082:Fatty acid biosynthesis, initiation
79 M00083:Fatty acid biosynthesis, elongation
80 M00085:Fatty acid elongation in mitochondria
81 M00086:beta-Oxidation, acyl-CoA synthesis
82 M00087:beta-Oxidation
83 M00088:Ketone body biosynthesis, acetyl-CoA => acetoacetate/3-hydroxybutyrate/acetone
84 M00089:Triacylglycerol biosynthesis
85 M00090:Phosphatidylcholine (PC) biosynthesis, choline => PC
86 M00091:Phosphatidylcholine (PC) biosynthesis, PE => PC
87 M00092:Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE
88 M00093:Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
89 M00094:Ceramide biosynthesis
90 M00095:C5 isoprenoid biosynthesis, mevalonate pathway
91 M00096:C5 isoprenoid biosynthesis, non-mevalonate pathway
92 M00097:Lycopene biosynthesis, geranylgeranyl-PP => lycopene
93 M00098:Acylglycerol degradation
94 M00099:Sphingosine biosynthesis
95 M00100:Sphingosine degradation
96 M00101:Cholesterol biosynthesis, FPP => cholesterol
97 M00102:Ergocalciferol biosynthesis, FPP => ergosterol/ergocalciferol
98 M00103:Cholecalciferol biosynthesis
99 M00104:Bile acid biosynthesis, cholesterol => cholate/chenodeoxycholate
100 M00106:Conjugated bile acid biosynthesis, cholate => taurocholate/glycocholate
101 M00107:Steroid hormone biosynthesis, cholesterol => pregnenolone => progesterone
102 M00108:C21-Steroid hormone biosynthesis, progesterone => corticosterone/aldosterone
103 M00109:C21-Steroid hormone biosynthesis, progesterone => cortisol/cortisone
104 M00110:C19/C18-Steroid hormone biosynthesis, pregnenolone => androstenedione => estrone
105 M00112:Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
106 M00113:Jasmonic acid biosynthesis
107 M00114:Ascorbate biosynthesis, plants, fructose-6P => ascorbate
108 M00115:NAD biosynthesis, aspartate => quinolinate => NAD
109 M00116:Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
110 M00117:Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
111 M00118:Glutathione biosynthesis, glutamate => glutathione
112 M00119:Pantothenate biosynthesis, valine/L-aspartate => pantothenate
113 M00120:Coenzyme A biosynthesis, pantothenate => CoA
114 M00121:Heme biosynthesis, plants and bacteria, glutamate => heme
115 M00122:Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
116 M00123:Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
117 M00124:Pyridoxal phosphate biosynthesis, erythrose-4P => pyridoxal-P
118 M00125:Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
119 M00126:Tetrahydrofolate biosynthesis, GTP => THF
120 M00127:Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
121 M00128:Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinone
122 M00129:Ascorbate biosynthesis, animals, glucose-1P => ascorbate
123 M00130:Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
124 M00131:Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol
125 M00132:Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate
126 M00133:Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
127 M00134:Polyamine biosynthesis, arginine => ornithine => putrescine
128 M00135:GABA biosynthesis, eukaryotes, putrescine => GABA
129 M00136:GABA biosynthesis, prokaryotes, putrescine => GABA
130 M00137:Flavanone biosynthesis, phenylalanine => naringenin
131 M00138:Flavonoid biosynthesis, naringenin => pelargonidin
132 M00140:C1-unit interconversion, prokaryotes
133 M00141:C1-unit interconversion, eukaryotes
134 M00142:NADH:ubiquinone oxidoreductase, mitochondria
135 M00143:NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria
136 M00144:NADH:quinone oxidoreductase, prokaryotes
137 M00145:NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria
138 M00146:NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
139 M00147:NADH dehydrogenase (ubiquinone) 1 beta subcomplex
140 M00148:Succinate dehydrogenase (ubiquinone)
141 M00149:Succinate dehydrogenase, prokaryotes
142 M00150:Fumarate reductase, prokaryotes
143 M00151:Cytochrome bc1 complex respiratory unit
144 M00152:Cytochrome bc1 complex
145 M00153:Cytochrome bd ubiquinol oxidase
146 M00154:Cytochrome c oxidase
147 M00155:Cytochrome c oxidase, prokaryotes
148 M00156:Cytochrome c oxidase, cbb3-type
149 M00157:F-type ATPase, prokaryotes and chloroplasts
150 M00158:F-type ATPase, eukaryotes
151 M00159:V/A-type ATPase, prokaryotes
152 M00160:V-type ATPase, eukaryotes
153 M00161:Photosystem II
154 M00162:Cytochrome b6f complex
155 M00163:Photosystem I
156 M00165:Reductive pentose phosphate cycle (Calvin cycle)
157 M00168:CAM (Crassulacean acid metabolism), dark
158 M00169:CAM (Crassulacean acid metabolism), light
159 M00170:C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type
160 M00171:C4-dicarboxylic acid cycle, NAD - malic enzyme type
161 M00172:C4-dicarboxylic acid cycle, NADP - malic enzyme type
162 M00173:Reductive citrate cycle (Arnon-Buchanan cycle)
163 M00174:Methane oxidation, methanotroph, methane => formaldehyde
164 M00175:Nitrogen fixation, nitrogen => ammonia
165 M00176:Assimilatory sulfate reduction, sulfate => H2S
166 M00307:Pyruvate oxidation, pyruvate => acetyl-CoA
167 M00308:Semi-phosphorylative Entner-Doudoroff pathway, gluconate => glycerate-3P
168 M00309:Non-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate
169 M00338:Cysteine biosynthesis, homocysteine + serine => cysteine
170 M00344:Formaldehyde assimilation, xylulose monophosphate pathway
171 M00345:Formaldehyde assimilation, ribulose monophosphate pathway
172 M00346:Formaldehyde assimilation, serine pathway
173 M00356:Methanogenesis, methanol => methane
174 M00357:Methanogenesis, acetate => methane
175 M00358:Coenzyme M biosynthesis
176 M00363:EHEC pathogenicity signature, Shiga toxin
177 M00364:C10-C20 isoprenoid biosynthesis, bacteria
178 M00365:C10-C20 isoprenoid biosynthesis, archaea
179 M00366:C10-C20 isoprenoid biosynthesis, plants
180 M00367:C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
181 M00368:Ethylene biosynthesis, methionine => ethylene
182 M00369:Cyanogenic glycoside biosynthesis, tyrosine => dhurrin
183 M00370:Glucosinolate biosynthesis, tryptophan => glucobrassicin
184 M00371:Castasterone biosynthesis, plants, campesterol => castasterone
185 M00372:Abscisic acid biosynthesis, plants, 9'-cis-neoxanthin/9-cis-violaxanthin => abscisic acid
186 M00373:Ethylmalonyl pathway
187 M00374:Dicarboxylate-hydroxybutyrate cycle
188 M00375:Hydroxypropionate-hydroxybutylate cycle
189 M00376:3-Hydroxypropionate bi-cycle
190 M00377:Reductive acetyl-CoA pathway (Wood-Ljungdahl pathway)
191 M00378:F420 biosynthesis, archaea
192 M00415:Fatty acid elongation in endoplasmic reticulum
193 M00416:Cytochrome aa3-600 menaquinol oxidase
194 M00417:Cytochrome o ubiquinol oxidase
195 M00418:Toluene degradation, anaerobic, toluene => benzoyl-CoA
196 M00419:Cymene degradation, p-cymene => p-cumate
197 M00422:Acetyl-CoA pathway, CO2 => acetyl-CoA
198 M00432:Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
199 M00433:Lysine biosynthesis, 2-oxoglutarate => 2-oxoadipate
200 M00525:Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
201 M00526:Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
202 M00527:Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
203 M00528:Nitrification, ammonia => nitrite
204 M00529:Denitrification, nitrate => nitrogen
205 M00530:Dissimilatory nitrate reduction, nitrate => ammonia
206 M00531:Assimilatory nitrate reduction, nitrate => ammonia
207 M00532:Photorespiration
208 M00533:Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate
209 M00534:Naphthalene degradation, naphthalene => salicylate
210 M00535:Isoleucine biosynthesis, pyruvate => 2-oxobutanoate
211 M00537:Xylene degradation, xylene => methylbenzoate
212 M00538:Toluene degradation, toluene => benzoate
213 M00539:Cumate degradation, p-cumate => 2-oxopent-4-enoate + 2-methylpropanoate
214 M00540:Benzoate degradation, cyclohexanecarboxylic acid =>pimeloyl-CoA
215 M00541:Benzoyl-CoA degradation, benzoyl-CoA => 3-hydroxypimeloyl-CoA
216 M00542:EHEC/EPEC pathogenicity signature, T3SS and effectors
217 M00543:Biphenyl degradation, biphenyl => 2-oxopent-4-enoate + benzoate
218 M00544:Carbazole degradation, carbazole => 2-oxopent-4-enoate + anthranilate
219 M00545:Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA
220 M00546:Purine degradation, xanthine => urea
221 M00547:Benzene/toluene degradation, benzene => catechol / toluene => 3-methylcatechol
222 M00548:Benzene degradation, benzene => catechol
223 M00549:UDP-Glc biosynthesis, Glc => UDP-Glc
224 M00550:Ascorbate degradation, ascorbate => D-xylulose-5P
225 M00551:Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol
226 M00552:D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P
227 M00554:UDP-Gal biosynthesis, Gal => UDP-Gal
228 M00555:Betaine biosynthesis, choline => betaine
229 M00563:Methanogenesis, methylamine/dimethylamine/trimethylamine => methane
230 M00564:Helicobacter pylori pathogenicity signature, cagA pathogenicity island
231 M00565:Trehalose biosynthesis, D-glucose-1P => trehalose
232 M00567:Methanogenesis, CO2 => methane
233 M00568:Catechol ortho-cleavage, catechol => 3-oxoadipate
234 M00569:Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA
235 M00570:Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
236 M00572:Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP
237 M00573:Biotin biosynthesis, BioI pathway, long-chain-acyl-ACP => pimeloyl-ACP => biotin
238 M00574:Pertussis pathogenicity signature, pertussis toxin
239 M00575:Pertussis pathogenicity signature, T1SS
240 M00576:ETEC pathogenicity signature, heat-labile and heat-stable enterotoxins
241 M00577:Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin
242 M00579:Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
243 M00580:Pentose phosphate pathway, archaea, fructose-6P => ribose-5P
244 M00595:Sulfur oxidation, SOX system, thiosulfate => sulfate
245 M00596:Dissimilatory sulfate reduction, sulfate => H2S
246 M00597:Anoxygenic photosystem II
247 M00598:Anoxygenic photosystem I
248 M00608:2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate
249 M00609:Cysteine biosynthesis, methionine => cysteine
250 M00611:Oxygenic photosynthesis in plants and cyanobacteria
251 M00612:Anoxygenic photosynthesis in purple bacteria
252 M00613:Anoxygenic photosynthesis in green nonsulfur bacteria
253 M00614:Anoxygenic photosynthesis in green sulfur bacteria
254 M00615:Nitrate assimilation
255 M00616:Sulfate-sulfur assimilation
256 M00617:Methanogen
257 M00618:Acetogen
258 M00620:Incomplete reductive citrate cycle, acetyl-CoA => oxoglutarate
259 M00621:Glycine cleavage system
260 M00622:Nicotinate degradation, nicotinate => fumarate
261 M00623:Phthalate degradation, phthalate => protocatechuate
262 M00624:Terephthalate degradation, terephthalate => 3,4-dihydroxybenzoate
263 M00625:Methicillin resistance
264 M00627:beta-Lactam resistance, Bla system
265 M00630:D-Galacturonate degradation (fungi), D-galacturonate => glycerol
266 M00631:D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde-3P
267 M00632:Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
268 M00633:Semi-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate-3P
269 M00636:Phthalate degradation, phthalate => protocatechuate
270 M00637:Anthranilate degradation, anthranilate => catechol
271 M00638:Salicylate degradation, salicylate => gentisate
272 M00639:Multidrug resistance, efflux pump MexCD-OprJ
273 M00641:Multidrug resistance, efflux pump MexEF-OprN
274 M00642:Multidrug resistance, efflux pump MexJK-OprM
275 M00643:Multidrug resistance, efflux pump MexXY-OprM
276 M00649:Multidrug resistance, efflux pump AdeABC
277 M00651:Vancomycin resistance, D-Ala-D-Lac type
278 M00652:Vancomycin resistance, D-Ala-D-Ser type
279 M00660:Xanthomonas spp. pathogenicity signature, T3SS and effectors
280 M00661:Paspaline biosynthesis, geranylgeranyl-PP + indoleglycerol phosphate => paspaline
281 M00664:Nodulation
282 M00672:Penicillin biosynthesis, aminoadipate + cycteine + valine => penicillin
283 M00673:Cephamycin C biosynthesis, aminoadipate + cycteine + valine => cephamycin C
284 M00674:Clavaminate biosynthesis, arginine + glyceraldehyde-3P => clavaminate
285 M00675:Carbapenem-3-carboxylate biosynthesis, pyrroline-5-carboxylate + malonyl-CoA => carbapenem-3-carboxylate
286 M00696:Multidrug resistance, efflux pump AcrEF-TolC
287 M00697:Multidrug resistance, efflux pump MdtEF-TolC
288 M00698:Multidrug resistance, efflux pump BpeEF-OprC
289 M00700:Multidrug resistance, efflux pump AbcA
290 M00702:Multidrug resistance, efflux pump NorB
291 M00704:Tetracycline resistance, efflux pump Tet38
292 M00705:Multidrug resistance, efflux pump MepA
293 M00714:Multidrug resistance, efflux pump QacA
294 M00718:Multidrug resistance, efflux pump MexAB-OprM
295 M00725:Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon
296 M00726:Cationic antimicrobial peptide (CAMP) resistance, lysyl-phosphatidylglycerol (L-PG) synthase MprF
297 M00730:Cationic antimicrobial peptide (CAMP) resistance, VraFG transporter
298 M00736:Nocardicin A biosynthesis, L-pHPG + arginine + serine => nocardicin A
299 M00740:Methylaspartate cycle
300 M00741:Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
301 M00744:Cationic antimicrobial peptide (CAMP) resistance, protease PgtE
302 M00745:Imipenem resistance, repression of porin OprD
303 M00746:Multidrug resistance, repression of porin OmpF
304 M00761:Und-P-alpha-L-Ara4N biosynthesis, UDP-Glc => UDP-L-Ara4FN => Und-P-alpha-L-Ara4N
305 M00763:Ornithine biosynthesis, mediated by LysW, glutamate => ornithine
306 M00769:Multidrug resistance, efflux pump MexPQ-OpmE
307 M00773:Tylosin biosynthesis, methylmalonyl-CoA + malonyl-CoA => tylactone => tylosin
308 M00774:Erythromycin biosynthesis, propanoyl-CoA + methylmalonyl-CoA => deoxyerythronolide B => erythromycin A/B
309 M00775:Oleandomycin biosynthesis, malonyl-CoA + methylmalonyl-CoA => 8,8a-deoxyoleandolide => oleandomycin
310 M00776:Pikromycin/methymycin biosynthesis, methylmalonyl-CoA + malonyl-CoA => narbonolide/10-deoxymethynolide => pikromycin/methymycin
311 M00777:Avermectin biosynthesis, 2-methylbutanoyl-CoA/isobutyryl-CoA => 6,8a-Seco-6,8a-deoxy-5-oxoavermectin 1a/1b aglycone => avermectin A1a/B1a/A1b/B1b
312 M00778:Type II polyketide backbone biosynthesis, acyl-CoA + malonyl-CoA => polyketide
313 M00779:Dihydrokalafungin biosynthesis, octaketide => dihydrokalafungin
314 M00780:Tetracycline/oxytetracycline biosynthesis, pretetramide => tetracycline/oxytetracycline
315 M00781:Nogalavinone/aklavinone biosynthesis, deoxynogalonate/deoxyaklanonate => nogalavinone/aklavinone
316 M00782:Mithramycin biosynthesis, 4-demethylpremithramycinone => mithramycin
317 M00783:Tetracenomycin C/8-demethyltetracenomycin C biosynthesis, tetracenomycin F2 => tetracenomycin C/8-demethyltetracenomycin C
318 M00784:Elloramycin biosynthesis, 8-demethyltetracenomycin C => elloramycin A
319 M00785:Cycloserine biosynthesis, arginine/serine => cycloserine
320 M00786:Fumitremorgin alkaloid biosynthesis, tryptophan + proline => fumitremorgin C/A
321 M00787:Bacilysin biosynthesis, prephenate => bacilysin
322 M00788:Terpentecin biosynthesis, GGAP => terpentecin
323 M00789:Rebeccamycin biosynthesis, tryptophan => rebeccamycin
324 M00790:Pyrrolnitrin biosynthesis, tryptophan => pyrrolnitrin
325 M00793:dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
326 M00794:dTDP-6-deoxy-D-allose biosynthesis
327 M00795:dTDP-beta-L-noviose biosynthesis
328 M00796:dTDP-D-mycaminose biosynthesis
329 M00797:dTDP-D-desosamine biosynthesis
330 M00798:dTDP-L-mycarose biosynthesis
331 M00799:dTDP-L-oleandrose biosynthesis
332 M00800:dTDP-L-megosamine biosynthesis
333 M00801:dTDP-L-olivose biosynthesis
334 M00802:dTDP-D-forosamine biosynthesis
335 M00803:dTDP-D-angolosamine biosynthesis
336 M00804:Complete nitrification, comammox, ammonia => nitrite => nitrate
337 M00805:Staurosporine biosynthesis, tryptophan => staurosporine
338 M00808:Violacein biosynthesis, tryptophan => violacein
339 M00810:Nicotine degradation, pyridine pathway, nicotine => 2,6-dihydroxypyridine/succinate semialdehyde
340 M00811:Nicotine degradation, pyrrolidine pathway, nicotine => succinate semialdehyde
341 M00814:Acarbose biosynthesis, sedoheptulopyranose-7P => acarbose
342 M00815:Validamycin A biosynthesis, sedoheptulopyranose-7P => validamycin A
343 M00819:Pentalenolactone biosynthesis, farnesyl-PP => pentalenolactone
344 M00823:Chlortetracycline biosynthesis, pretetramide => chlortetracycline
345 M00824:9-membered enediyne core biosynthesis, malonyl-CoA => 3-hydroxyhexadeca-4,6,8,10,12,14-hexaenoyl-ACP => 9-membered enediyne core
346 M00825:10-membered enediyne core biosynthesis, malonyl-CoA => 3-hydroxyhexadeca-4,6,8,10,12,14-hexaenoyl-ACP => 10-membered enediyne core
347 M00826:C-1027 benzoxazolinate moiety biosynthesis, chorismate => benzoxazolinyl-CoA
348 M00827:C-1027 beta-amino acid moiety biosynthesis, tyrosine => 3-chloro-4,5-dihydroxy-beta-phenylalanyl-PCP
349 M00828:Maduropeptin beta-hydroxy acid moiety biosynthesis, tyrosine => 3-(4-hydroxyphenyl)-3-oxopropanoyl-PCP
350 M00829:3,6-Dimethylsalicylyl-CoA biosynthesis, malonyl-CoA => 6-methylsalicylate => 3,6-dimethylsalicylyl-CoA
351 M00830:Neocarzinostatin naphthoate moiety biosynthesis, malonyl-CoA => 2-hydroxy-5-methyl-1-naphthoate => 2-hydroxy-7-methoxy-5-methyl-1-naphthoyl-CoA
352 M00831:Kedarcidin 2-hydroxynaphthoate moiety biosynthesis, malonyl-CoA => 3,6,8-trihydroxy-2-naphthoate => 3-hydroxy-7,8-dimethoxy-6-isopropoxy-2-naphthoyl-CoA
353 M00832:Kedarcidin 2-aza-3-chloro-beta-tyrosine moiety biosynthesis, azatyrosine => 2-aza-3-chloro-beta-tyrosyl-PCP
354 M00833:Calicheamicin biosynthesis, calicheamicinone => calicheamicin
355 M00834:Calicheamicin orsellinate moiety biosynthesis, malonyl-CoA => orsellinate-ACP => 5-iodo-2,3-dimethoxyorsellinate-ACP
356 M00835:Pyocyanine biosynthesis, chorismate => pyocyanine
357 M00836:Coenzyme F430 biosynthesis, sirohydrochlorin => coenzyme F430
358 M00837:Prodigiosin biosynthesis, L-proline => prodigiosin
359 M00838:Undecylprodigiosin biosynthesis, L-proline => undecylprodigiosin
360 M00840:Tetrahydrofolate biosynthesis, mediated by ribA and trpF, GTP => THF
361 M00841:Tetrahydrofolate biosynthesis, mediated by PTPS, GTP => THF
362 M00842:Tetrahydrobiopterin biosynthesis, GTP => BH4
363 M00843:L-threo-Tetrahydrobiopterin biosynthesis, GTP => L-threo-BH4
364 M00844:Arginine biosynthesis, ornithine => arginine
365 M00845:Arginine biosynthesis, glutamate => acetylcitrulline => arginine
366 M00846:Siroheme biosynthesis, glutamyl-tRNA => siroheme
367 M00847:Heme biosynthesis, archaea, siroheme => heme
368 M00848:Aurachin biosynthesis, anthranilate => aurachin A
369 M00849:C5 isoprenoid biosynthesis, mevalonate pathway, archaea
370 M00850:Vibrio cholerae pathogenicity signature, cholera toxins
371 M00851:Carbapenem resistance
372 M00852:Vibrio cholerae pathogenicity signature, toxin coregulated pilus
373 M00853:ETEC pathogenicity signature, colonization factors
374 M00854:Glycogen biosynthesis, glucose-1P => glycogen/starch
375 M00855:Glycogen degradation, glycogen => glucose-6P
376 M00856:Salmonella enterica pathogenicity signature, typhoid toxin
377 M00857:Salmonella enterica pathogenicity signature, Vi antigen
378 M00859:Bacillus anthracis pathogenicity signature, anthrax toxin
379 M00860:Bacillus anthracis pathogenicity signature, polyglutamic acid capsule biosynthesis
380 M00861:beta-Oxidation, peroxisome, VLCFA
381 M00862:beta-Oxidation, peroxisome, tri/dihydroxycholestanoyl-CoA => choloyl/chenodeoxycholoyl-CoA
382 M00866:KDO2-lipid A biosynthesis, Raetz pathway, non-LpxL-LpxM type
383 M00867:KDO2-lipid A modification pathway
384 M00868:Heme biosynthesis, animals and fungi, glycine => heme
385 M00872:O-glycan biosynthesis, mannose type (core M3)
386 M00873:Fatty acid biosynthesis in mitochondria, animals
387 M00874:Fatty acid biosynthesis in mitochondria, fungi
388 M00875:Staphyloferrin B biosynthesis, L-serine => staphyloferrin B
389 M00876:Staphyloferrin A biosynthesis, L-ornithine => staphyloferrin A
390 M00877:Kanosamine biosynthesis, glucose-6P => kanosamine
391 M00878:Phenylacetate degradation, phenylaxetate => acetyl-CoA/succinyl-CoA
392 M00879:Arginine succinyltransferase pathway, arginine => glutamate
393 M00880:Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
394 M00881:Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
395 M00882:Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H
396 M00883:Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2
397 M00884:Lipoic acid biosynthesis, octanoyl-CoA => dihydrolipoyl-E2
398 M00885:Meromycolic acid biosynthesis, initiation and elongation FAS II (KasA)
399 M00886:Meromycolic acid biosynthesis, initiation and elongation FAS II (KasA and KasB)
400 M00887:Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
401 M00888:Galactofuranan biosynthesis, decaprenyl phosphate + UDP-GlcNAc (+ dTDP-Rha/UDP-Galf) => GL-5
402 M00889:Puromycin biosynthesis, ATP => puromycin
403 M00890:Roseoflavin biosynthesis, FMN => roseoflavin
404 M00891:Ditryptophenaline biosynthesis, tryptophan + phenylalanine => ditryptophenaline
405 M00892:UDP-GlcNAc biosynthesis, eukaryotes, Fru-6P => UDP-GlcNAc
406 M00893:Lovastatin biosynthesis, malonyl-CoA => lovastatin acid
407 M00894:Cannabidiol biosynthesis, malonyl-CoA => cannabidiol/dronabinol
408 M00895:Thiamine biosynthesis, prokaryotes, AIR (+ DXP/glycine) => TMP/TPP
409 M00896:Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
410 M00897:Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
411 M00898:Thiamine biosynthesis, pyridoxal-5P => TMP/thiamine/TPP
412 M00899:Thiamine salvage pathway, HMP/HET => TMP
413 M00900:Crocin biosynthesis, crocetin => crocin
414 M00901:Fumiquinazoline biosynthesis, tryptophan + alanine + anthranilate => fumiquinazoline
415 M00902:Podophyllotoxin biosynthesis, coniferyl alcohol => podophyllotoxin
416 M00903:Fosfomycin biosynthesis, phosphoenolpyruvate => fosfomycin
417 M00904:Dapdiamides biosynthesis, L-2,3-diaminopropanoate => dapdiamide A/B/C
418 M00905:Grixazone biosynthesis, aspartate 4-semialdehyde => grixazone B
419 M00906:Ethynylserine biosynthesis, lysine => ethynylserine
420 M00909:UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
421 M00910:Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine
422 M00911:Riboflavin biosynthesis, fungi, GTP => riboflavin/FMN/FAD
423 M00912:NAD biosynthesis, tryptophan => quinolinate => NAD
424 M00913:Pantothenate biosynthesis, 2-oxoisovalerate/spermine => pantothenate
425 M00914:Coenzyme A biosynthesis, archaea, 2-oxoisovalerate => 4-phosphopantoate => CoA
426 M00915:Caffeine degradation, caffeine => xanthine
427 M00916:Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
428 M00917:Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol
429 M00918:Aerobactin biosynthesis, lysine => aerobactin
430 M00919:Ectoine degradation, ectoine => aspartate
431 M00921:Cyclooctatin biosynthesis, dimethylallyl-PP + isopentenyl-PP => cyclooctatin
432 M00922:CMP-Neu5Ac biosynthesis, bacteria, UDP-GlcNAc => CMP-Neu5Ac
433 M00923:UDP-L-FucNAc biosynthesis, UDP-GlcNAc => UDP-L-FucNAc
434 M00924:Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide
435 M00925:Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
436 M00926:Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
437 M00927:Gibberellin A12 biosynthesis, plants, GAPP => GA12
438 M00928:Gibberellin A4/A1 biosynthesis, plants, GA12/GA53 => GA4/GA1
439 M00929:Gibberellin A1 biosynthesis, GGPP => GA1
440 M00930:Menaquinone biosynthesis, futalosine pathway
441 M00931:Menaquinone biosynthesis, modified futalosine pathway
442 M00932:Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
443 M00933:Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol
444 M00934:Mycinamicin biosynthesis, malonyl-CoA + methylmalonyl-CoA => protomycinolide IV => mycinamicin II
445 M00935:Methanofuran biosynthesis
446 M00936:Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin
447 M00937:Aflatoxin biosynthesis, malonyl-CoA => aflatoxin B1
448 M00938:Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
449 M00939:Pyrimidine degradation, uracil => 3-hydroxypropanoate
450 M00940:Flavanone biosynthesis, p-coumaroyl-CoA => liquiritigenin
451 M00941:Isoflavone biosynthesis, liquiritigenin/naringenin => daidzein/genistein
452 M00942:Pterocarpan biosynthesis, daidzein => medicarpin
453 M00943:Reticuline biosynthesis, dopamine + 4HPAA => (S)-reticuline
454 M00944:Morphine biosynthesis, (S)-reticuline => morphine
455 M00945:Sanguinarine biosynthesis, (S)-reticuline => sanguinarine
456 M00946:Noscapine biosynthesis, (S)-reticuline => noscapine
457 M00947:D-Arginine racemization, D-arginine => L-arginine
458 M00948:Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate
459 M00949:Staphylopine biosynthesis, L-histidine => staphylopine
460 M00950:Biotin biosynthesis, BioU pathway, pimeloyl-ACP/CoA => biotin
461 M00951:Cremeomycin biosynthesis, aspartate/3,4-AHBA => cremeomycin
462 M00952:Benzoxazinoid biosynthesis, indoleglycerol phosphate => DIMBOA-glucoside
463 M00953:Mugineic acid biosynthesis, methionine => 3-epihydroxymugineic acid
464 M00954:CMP-KDN biosynthesis, Man-6P => CMP-KDN
465 M00955:CMP-Neu5Ac/Neu5Gc biosynthesis, animals, UDP-GlcNAc => CMP-Neu5Ac => CMP-Neu5Gc
466 M00956:Lysine degradation, bacteria, L-lysine => succinate
467 M00957:Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
468 M00958:Adenine ribonucleotide degradation, AMP => Urate
469 M00959:Guanine ribonucleotide degradation, GMP => Urate
470 M00960:Lysine degradation, bacteria, L-lysine => D-lysine => succinate
471 M00961:Betacyanin biosynthesis, L-tyrosine => amaranthin
472 M00962:Psilocybin biosynthesis, tryptophan => psilocybin
473 M00963:Chanoclavine aldehyde biosynthesis, tryptophan => chanoclavine-I aldehyde
474 M00964:Fumigaclavine biosynthesis, chanoclavine-I aldehyde => fumigaclavine C
475 M00965:Vinblastine biosynthesis, geissoschizine => vinblastine
476 M00966:Equol biosynthesis, daidzein => equol
477 M00967:Flavone degradation, luteolin/apigenin => DHCA/phloretate
478 M00968:Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
479 M00969:Fumagillin biosynthesis, farnesyl-PP => fumagillin
480 M00970:Proline degradation, proline => glutamate
481 M00971:QS-7 biosynthesis, 2,3-epoxysqualene => QS-7
482 M00972:Proline metabolism
483 M00973:Anammox, nitrite + ammonia => nitrogen
484 M00974:Betaine metabolism, animals, betaine => glycine
485 M00975:Betaine degradation, bacteria, betaine => pyruvate
486 M00976:C19-Steroid hormone biosynthesis, pregnenolone => testosterone => dihydrotestosterone
487 M00977:C19-Steroid hormone biosynthesis (androgen backdoor pathway), pregnenolone => androsterone => dihydrotestosterone
488 M00978:Ornithine-ammonia cycle
489 M00979:Ajmaline biosynthesis, geissoschizine => ajmaline
490 M00980:Strychnine biosynthesis, geissoschizine => strychnine
491 M00981:Geissoschizine biosynthesis, tryptophan => geissoschizine
492 M00982:Methylcitrate cycle
493 M00983:GPI-anchor remodeling
494 M00984:Sulfur oxidation, tetrathionate intermediate (S4I) pathway, thiosulfate => sulfur + sulfate + thiosulfate
495 M00985:Sulfide oxidation, sulfide => sulfur
496 M00986:Sulfur reduction, sulfur => sulfide
497 M00987:Assimilatory sulfate reduction, plants, sulfate => H2S
498 M00988:PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
499 M00989:Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
500 M00990:Dimethylsulfoniopropionate (DMSP) degradation, demethylation pathway, DMSP => methanethiol
501 M00991:Dimethylsulfoniopropionate (DMSP) degradation, cleavage pathway, DMSP => acetyl-CoA
502 M00992:Dimethylsulfoniopropionate (DMSP) degradation, cleavage pathway, DMSP => acrylate => acetyl-CoA
503 M00993:Dimethylsulfoniopropionate (DMSP) degradation, cleavage pathway, DMSP => propionyl-CoA
504 M00994:UDP-GlcA biosynthesis, myo-inositol => GlcA => UDP-GlcA
505 M00995:UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
506 M00996:UDP-MurNAc biosynthesis, anhMurNAc => UDP-MurNAc
507 M00997:UDP-Xyl/L-Ara biosynthesis, UDP-Glc => UDP-Xyl => UDP-L-Ala
508 M00998:UDP-L-Ara biosynthesis, L-Ala => UDP-L-Ala
509 M00999:UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
510 M01000:GDP-Man biosynthesis, Fru-6P => GDP-Man
511 M01001:GDP-L-Fuc biosynthesis, L-Fuc => GDP-L-Fuc
512 M01002:UDP-GalNAc biosynthesis, Fru-6P => UDP-GalNAc
513 M01003:UDP-GlcNAc biosynthesis, GlcNAc => UDP-GlcNAc
514 M01004:UDP-Galf biosynthesis, UDP-Glc => UDP-Galf
515 M01005:UDP-XylNAc biosynthesis, UDP-GlcNAc => UDP-XylNAc
516 M01006:GDP-D-Rha4N biosynthesis, Fru-6P => GDP-D-Rha4N
517 M01007:CMP-Pse5Ac7Ac biosynthesis, UDP-GlcNAc => CMP-Pse5Ac7Ac
518 M01008:CMP-8eLeg5Ac7Ac biosynthesis, UDP-GlcNAc => CMP-8eLeg5Ac7Ac
519 M01009:UDP-QuiNAc biosynthesis, UDP-GlcNAc => UDP-QuiNAc
520 M01010:UDP-BacNAc4NAc biosynthesis, UDP-GlcNAc => UDP-BacNAc4NAc
521 M01011:CMP-Leg5Ac7Ac biosynthesis, UDP-BacNAc4NAc => CMP-Leg5Ac7Ac
522 M01012:CMP-Leg5Ac7Ala biosynthesis, UDP-GlcNAc => CMP-Leg5Ac7Ala
523 M01013:Molting hormone biosynthesis, insects, 2,22,25-trideoxyecdysone => ecdysone => 20-hydroxyecdysone
524 M01014:UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA
525 M01015:GDP-Man biosynthesis, Man => GDP-Man
526 M01016:GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
527 M01017:GDP-L-Col biosynthesis, GDP-Man => GDP-L-Col
528 M01018:GDP-D-Rha biosynthesis, GDP-Man => GDP-D-Rha
529 M01019:GDP-6-deoxy-Tal biosynthesis, GDP-Man => GDP-6-deoxy-Tal
530 M01020:GDP-D-Rha4NAc biosynthesis, GDP-Man => GDP-D-Rha4N => GDP-D-Rha4NAc
531 M01021:UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
532 M01022:dTDP-6-deoxy-L-Tal biosynthesis, Glc-1P => dTDP-6-deoxy-L-Tal
533 M01023:dTDP-D-Fuc3NAc biosynthesis, Glc-1P => dTDP-D-Fuc3NAc
534 M01024:dTDP-Qui3NAc biosynthesis, Glc-1P => dTDP-Qui3NAc
535 M01025:dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
536 M01026:dTDP-Qui4NAc biosynthesis, Glc-1P => dTDP-Qui4NAc
537 M01027:dTDP-D-Fucf biosynthesis, Glc-1P => dTDP-D-Fucf
538 M01028:GDP-DDmanHep biosynthesis, sedoheptulose-7P => GDP-DDmanHep
539 M01029:CDP-Tyv biosynthesis, Glc-1P => CDP-Par => CDP-Tyv
540 M01030:CDP-Abe biosynthesis, Glc-1P => CDP-Abe
541 M01031:CDP-Asc biosynthesis, Glc-1P => CDP-Asc
542 M01032:UDP-D-FucNAc biosynthesis, UDP-GlcNAc => UDP-D-FucNAc
543 M01033:UDP-yelosamine biosynthesis, UDP-GlcNAc => UDP-yelosamine
544 M01034:GDP-D-Rha4NFormyl biosynthesis, GDP-Man => GDP-D-Rha4N => GDP-D-Rha4NFormyl
545 M01035:UDP-ManNAc3NAcA biosynthesis, UDP-GlcNAc => UDP-ManNAc3NAcA
546 M01036:UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA
547 M01037:UDP-D-FucNAc4N biosynthesis, UDP-GlcNAc => UDP-D-FucNAc4N
548 M01038:Staphyloxanthin biosynthesis, bacteria, farnesyl-PP => staphyloxanthin
549 M01039:Spirilloxanthin biosynthesis, bacteria, lycopene => spirilloxanthin
550 M01040:Lutein biosynthesis, plants, lycopene => lutein
551 M01041:Bacterioruberin biosynthesis, archaea, lycopene => bacterioruberin
552 M01042:Neurosporaxanthin biosynthesis, fungi, lycopene => neurosporaxanthin
553 M01043:Okenone biosynthesis, bacteria, lycopene => okenone
554 M01044:Astaxanthin biosynthesis, beta-carotene => astaxanthin
555 M01045:Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
556 M01046:Xanthophyll cycle
557 M01047:Juvenile hormone biosynthesis, insects, farnesyl-PP => juvenile hormone III