Mercurial > repos > iuc > jbrowse

comparison test-data/menus/test.xml @ 53:c6fd9fbd50e7 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit b6f9a87b6091cc881a49e0b6acfadc5e7786967f
author iuc
date Tue, 29 Jan 2019 05:33:26 -0500
parents 665c4f3e48ae
children e29039f307c4
comparison
equal deleted inserted replaced
52:809a7b878ab2 53:c6fd9fbd50e7
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <root> 2 <root>
3 <metadata> 3 <metadata>
4 <gencode>11</gencode> 4 <gencode>11</gencode>
5 <genomes> 5 <genomes>
6 <genome path="/tmp/tmpnh6QWY/files/000/dataset_14.dat"> 6 <genome path="/tmp/tmpWtvfKr/files/000/dataset_14.dat">
7 <metadata> 7 <metadata>
8 <dataset id="1ae74d26531588b0" hid="1" 8 <dataset id="1ae74d26531588b0" hid="1"
9 size="171.6 KB" 9 size="171.6 KB"
10 edam_format="format_1929" 10 edam_format="format_1929"
11 file_ext="fasta" /> 11 file_ext="fasta" />
12 <history id="8155e4b4bf1581ff" 12 <history id="8155e4b4bf1581ff"
13 user_email="test@bx.psu.edu" 13 user_email="test@bx.psu.edu"
14 user_id="2" 14 user_id="2"
15 display_name="test_history"/> 15 display_name="test_history"/>
16 <metadata 16 <metadata
17 dbkey="hg17" 17 dbkey="?"
18 data_lines="2881" 18 data_lines="2881"
19 sequences="1" 19 sequences="1"
20 /> 20 />
21 <tool 21 <tool
22 tool_id="upload1" 22 tool_id="upload1"
23 tool_version="1.1.4" 23 tool_version="1.1.6"
24 /> 24 />
25 </metadata> 25 </metadata>
26 </genome> 26 </genome>
27 </genomes> 27 </genomes>
28 <general> 28 <general>
29 <defaultLocation></defaultLocation> 29 <defaultLocation></defaultLocation>
30 <trackPadding>20</trackPadding> 30 <trackPadding>20</trackPadding>
31 31
35 <show_nav>true</show_nav> 35 <show_nav>true</show_nav>
36 <show_overview>true</show_overview> 36 <show_overview>true</show_overview>
37 <show_menu>true</show_menu> 37 <show_menu>true</show_menu>
38 <hideGenomeOptions>false</hideGenomeOptions> 38 <hideGenomeOptions>false</hideGenomeOptions>
39 </general> 39 </general>
40 <galaxyUrl>http://localhost:8080</galaxyUrl> 40 <galaxyUrl>http://localhost</galaxyUrl>
41 </metadata> 41 </metadata>
42 <tracks> 42 <tracks>
43 <track cat="With menu or index" format="gene_calls" visibility="default_off"> 43 <track cat="With menu or index" format="gene_calls" visibility="default_off">
44 <files> 44 <files>
45 <trackFile path="/tmp/tmpnh6QWY/files/000/dataset_15.dat" ext="gff3" label="1.gff"> 45 <trackFile path="/tmp/tmpWtvfKr/files/000/dataset_15.dat" ext="gff3" label="1.gff">
46 <metadata> 46 <metadata>
47 <dataset id="440a6c2b5d9efe20" hid="2" 47 <dataset id="440a6c2b5d9efe20" hid="2"
48 size="2.3 KB" 48 size="2.3 KB"
49 edam_format="format_1975" 49 edam_format="format_1975"
50 file_ext="gff3" /> 50 file_ext="gff3" />
51 <history id="8155e4b4bf1581ff" 51 <history id="8155e4b4bf1581ff"
52 user_email="test@bx.psu.edu" 52 user_email="test@bx.psu.edu"
53 user_id="2" 53 user_id="2"
54 display_name="test_history"/> 54 display_name="test_history"/>
55 <metadata 55 <metadata
56 dbkey="hg17" 56 dbkey="?"
57 data_lines="27" 57 data_lines="27"
58 comment_lines="19" 58 comment_lines="19"
59 columns="9" 59 columns="9"
60 column_names="" 60 column_names=""
61 delimiter="__tc__" 61 delimiter="__tc__"
62 attributes="6" 62 attributes="6"
63 /> 63 />
64 <tool 64 <tool
65 tool_id="upload1" 65 tool_id="upload1"
66 tool_version="1.1.4" 66 tool_version="1.1.6"
67 /> 67 />
68 </metadata> 68 </metadata>
69 </trackFile> 69 </trackFile>
70 </files> 70 </files>
71 71
108 </gff> 108 </gff>
109 </options> 109 </options>
110 </track> 110 </track>
111 <track cat="With menu or index" format="gene_calls" visibility="default_off"> 111 <track cat="With menu or index" format="gene_calls" visibility="default_off">
112 <files> 112 <files>
113 <trackFile path="/tmp/tmpnh6QWY/files/000/dataset_15.dat" ext="gff3" label="1.gff"> 113 <trackFile path="/tmp/tmpWtvfKr/files/000/dataset_15.dat" ext="gff3" label="1.gff">
114 <metadata> 114 <metadata>
115 <dataset id="440a6c2b5d9efe20" hid="2" 115 <dataset id="440a6c2b5d9efe20" hid="2"
116 size="2.3 KB" 116 size="2.3 KB"
117 edam_format="format_1975" 117 edam_format="format_1975"
118 file_ext="gff3" /> 118 file_ext="gff3" />
119 <history id="8155e4b4bf1581ff" 119 <history id="8155e4b4bf1581ff"
120 user_email="test@bx.psu.edu" 120 user_email="test@bx.psu.edu"
121 user_id="2" 121 user_id="2"
122 display_name="test_history"/> 122 display_name="test_history"/>
123 <metadata 123 <metadata
124 dbkey="hg17" 124 dbkey="?"
125 data_lines="27" 125 data_lines="27"
126 comment_lines="19" 126 comment_lines="19"
127 columns="9" 127 columns="9"
128 column_names="" 128 column_names=""
129 delimiter="__tc__" 129 delimiter="__tc__"
130 attributes="6" 130 attributes="6"
131 /> 131 />
132 <tool 132 <tool
133 tool_id="upload1" 133 tool_id="upload1"
134 tool_version="1.1.4" 134 tool_version="1.1.6"
135 /> 135 />
136 </metadata> 136 </metadata>
137 </trackFile> 137 </trackFile>
138 </files> 138 </files>
139 139