Mercurial > repos > iuc > iwtomics_testandplot

comparison testandplot.xml @ 2:d21625f83be6 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/iwtomics commit e0d4688a59e6eeba33adcfe803ac43d0bc2863e7"
author iuc
date Tue, 31 Aug 2021 09:08:07 +0000
parents 80b20d427556
children
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1:80b20d427556 2:d21625f83be6
1 <tool id="iwtomics_testandplot" name="IWTomics Test" version="@VERSION@.0"> 1 <tool id="iwtomics_testandplot" name="IWTomics Test" version="@VERSION@.0">
2 <description>and Plot</description> 2 <description>and Plot</description>
3 <macros> 3 <xrefs>
4 <import>macros.xml</import> 4 <xref type="bio.tools">iwtomics</xref>
5 </macros> 5 </xrefs>
6 <expand macro="requirements" /> 6 <macros>
7 7 <import>macros.xml</import>
8 <command detect_errors="exit_code"> 8 </macros>
9 <expand macro="requirements" />
10
11 <command detect_errors="exit_code">
9 <![CDATA[ 12 <![CDATA[
10 Rscript '$__tool_directory__/testandplot.R' adjustedpvaluematrix='${adjustedpvaluematrix}' iwtomicsrespdf='${iwtomicsrespdf}' iwtomicssumpdf='${iwtomicssumpdf}' iwtomicsrdata='${iwtomicsrdata}' iwtomicstests='${iwtomicstests}' iwtomicsselectedfeatures='${iwtomicsselectedfeatures}' 13 Rscript '$__tool_directory__/testandplot.R' adjustedpvaluematrix='${adjustedpvaluematrix}' iwtomicsrespdf='${iwtomicsrespdf}' iwtomicssumpdf='${iwtomicssumpdf}' iwtomicsrdata='${iwtomicsrdata}' iwtomicstests='${iwtomicstests}' iwtomicsselectedfeatures='${iwtomicsselectedfeatures}'
11 regionids='${regionids}' 14 regionids='${regionids}'
12 featureids='${featureids}' 15 featureids='${featureids}'
13 rdatafile='${rdata}' 16 rdatafile='${rdata}'