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comparison test-data/transcript_out/out.json @ 0:bfeae84e23ee draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interproscan commit 2f5d27a375fcc2e8d77914b3d9e402a9e2df2d97"
author iuc
date Mon, 15 Nov 2021 17:20:51 +0000
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-1:000000000000 0:bfeae84e23ee
1 {
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466 "md5" : "bb41314e271ff246f69dd1a3a2cba23a",
467 "crossReferences" : [ {
468 "name" : "FUN_000012-T1 FUN_000012",
469 "nucleotideSequence" : 1,
470 "id" : "FUN_000012-T1"
471 } ],
472 "openReadingFrames" : [ {
473 "id" : 7,
474 "start" : 11206,
475 "end" : 11718,
476 "strand" : "ANTISENSE",
477 "protein" : {
478 "sequence" : "CSRVTPESTTAILARVSQLIGQSATSGFVLALLWVAVTASMIGSNLGSCSRMSGSSCCSGILPLELPFLGPSWFHRLSCGRWHWMISGGWKLHRIRTLHYKGLVIHGLGDVTKAVVPGKTHLVHIVAHIQTFKFATILGIVLIVVSLIPLQFFVELKVLVIPLARRILRAT",
479 "md5" : "69752432fbe284f9672336b1173b136d",
480 "matches" : [ ],
481 "xref" : [ {
482 "name" : "orf142 source=FUN_000012-T1 coords=11718..11206 length=171 frame=4 desc=FUN_000012",
483 "id" : "orf142"
484 } ]
485 },
486 "nucleotideSequence" : 1
487 }, {
488 "id" : 10,
489 "start" : 595,
490 "end" : 1110,
491 "strand" : "ANTISENSE",
492 "protein" : {
493 "sequence" : "TTPRENASFAPGRILYGSASEESVIFDAFFPEVFALVATLEEELHGILVISISLRMQFDQESLALERNLAYLSPREGVDPRDVLEDCDAHVGHSQIKRHPFHILRRMHFHAIQLTPPSRLQEVKVRLRRGLTNMLFVVLHNLSLHGGVLVGHKAIRGQISMVGIILRNEVAA",
494 "md5" : "8b5d5a32bfde4a734177a55dd9418154",
495 "matches" : [ ],
496 "xref" : [ {
497 "name" : "orf321 source=FUN_000012-T1 coords=1110..595 length=172 frame=4 desc=FUN_000012",
498 "id" : "orf321"
499 } ]
500 },
501 "nucleotideSequence" : 1
502 }, {
503 "id" : 13,
504 "start" : 8374,
505 "end" : 8925,
506 "strand" : "ANTISENSE",
507 "protein" : {
508 "sequence" : "YFCYIGRTYCHFLVQNDLISTLDFACIVCFDVFHYYGSPDSTRWRRRPVKRILRLLERQACLPAERLGHWFVQVRHGVQRVSWLYRHVIEGNFRQWPVLRVLAARIGKAHKCVPLYIITLLFVYMGHRETSRDQGWRLGFIKTTKTGETIPSSRIAWNFRHLRRCSSVSIRNISKICITSRIGA",
509 "md5" : "c792986b585ed45b03b6c21ff3976fe4",
510 "matches" : [ ],
511 "xref" : [ {
512 "name" : "orf196 source=FUN_000012-T1 coords=8925..8374 length=184 frame=4 desc=FUN_000012",
513 "id" : "orf196"
514 } ]
515 },
516 "nucleotideSequence" : 1
517 }, {
518 "id" : 3,
519 "start" : 1567,
520 "end" : 2208,
521 "strand" : "ANTISENSE",
522 "protein" : {
523 "sequence" : "LGFAIYSGIYVVAFVKIEVLAIRDLVLLVCRAVKVRILVVPHVVDIGVDYVVRFSFGRVGIGVVEHAWDSCDRSCGRWALAKPEPKAEADAAAAEAAPIVSRLMVDAVKSESTSSSTNSSSSSSPTGSPSSSSVSAVPGSSASSSNSIELLRSTERTTVLVLCIVLWLVLLLGVLMLMSCIVIAWMHTSRIGTALLVVAAVTGRSPRLRSLGRK",
524 "md5" : "796ae4d6bd379b343d45415308fabd86",
525 "matches" : [ {
526 "signature" : {
527 "accession" : "mobidb-lite",
528 "name" : "disorder_prediction",
529 "description" : "consensus disorder prediction",
530 "signatureLibraryRelease" : {
531 "library" : "MOBIDB_LITE",
532 "version" : "2.0"
533 },
534 "entry" : null
535 },
536 "locations" : [ {
537 "start" : 113,
538 "end" : 138,
539 "location-fragments" : [ {
540 "start" : 113,
541 "end" : 138,
542 "dc-status" : "CONTINUOUS"
543 } ],
544 "sequence-feature" : ""
545 } ],
546 "model-ac" : "mobidb-lite"
547 } ],
548 "xref" : [ {
549 "name" : "orf304 source=FUN_000012-T1 coords=2208..1567 length=214 frame=4 desc=FUN_000012",
550 "id" : "orf304"
551 } ]
552 },
553 "nucleotideSequence" : 1
554 }, {
555 "id" : 9,
556 "start" : 7053,
557 "end" : 7601,
558 "strand" : "ANTISENSE",
559 "protein" : {
560 "sequence" : "DSVLVPKSIGLCFSKVGVLGFLLTKILGSLVGVCSLDGVGVISSLPTSSWSIRCLSSWHLRASSFPKSCDIPRGRAMEQLTLDSSSTELFSLPTDRLQSCCLCGLVSFSPLVQESELLERSLCLSKVFFFLPVSEEPVYFSKVSSTDFSIWGLALGGVKRIFKSDVGVAQFEYSSGLASSKVA",
561 "md5" : "882f08b6997fd5cf48c6f88575ad021a",
562 "matches" : [ ],
563 "xref" : [ {
564 "name" : "orf215 source=FUN_000012-T1 coords=7601..7053 length=183 frame=5 desc=FUN_000012",
565 "id" : "orf215"
566 } ]
567 },
568 "nucleotideSequence" : 1
569 }, {
570 "id" : 15,
571 "start" : 1296,
572 "end" : 1856,
573 "strand" : "SENSE",
574 "protein" : {
575 "sequence" : "HCGMGLSQSMQRLDDPFSDEEGSGYLGSPTRQSYRPHAFSSHSSPGGDLSDEELCSGLANLPGGSGMLGGGGGTATPLGSGYGQTEFEPLTFAPGTAVVDFAQSQQPPPTARSRSGSCASRRSQYSSSASTRPAAAPTTTLCTAPAQWFVRWISTALWSWRRRRRIRELRTRRRRRGSLWGRRRRRN",
576 "md5" : "a35b46a97905a750e8fc70890d827e9b",
577 "matches" : [ {
578 "signature" : {
579 "accession" : "mobidb-lite",
580 "name" : "disorder_prediction",
581 "description" : "consensus disorder prediction",
582 "signatureLibraryRelease" : {
583 "library" : "MOBIDB_LITE",
584 "version" : "2.0"
585 },
586 "entry" : null
587 },
588 "locations" : [ {
589 "start" : 1,
590 "end" : 57,
591 "location-fragments" : [ {
592 "start" : 1,
593 "end" : 57,
594 "dc-status" : "CONTINUOUS"
595 } ],
596 "sequence-feature" : ""
597 } ],
598 "model-ac" : "mobidb-lite"
599 }, {
600 "signature" : {
601 "accession" : "mobidb-lite",
602 "name" : "disorder_prediction",
603 "description" : "consensus disorder prediction",
604 "signatureLibraryRelease" : {
605 "library" : "MOBIDB_LITE",
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