Mercurial > repos > iuc > integron_finder
diff test-data/test5_integrons_table.tsv @ 2:9fdd3e97db8d draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/integron_finder commit 13f722da1a2d95586490e8534b9884abe61ba7cd
| author | iuc |
|---|---|
| date | Tue, 10 Feb 2026 15:53:43 +0000 |
| parents | 2729629d81db |
| children |
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--- a/test-data/test5_integrons_table.tsv Fri Feb 17 18:35:52 2023 +0000 +++ b/test-data/test5_integrons_table.tsv Tue Feb 10 15:53:43 2026 +0000 @@ -1,7 +1,8 @@ -# cmd: integron_finder /tmp/tmp3_ir6t5a/files/a/8/c/dataset_a8c83ef3-ab8b-416f-adb8-54a6ba99e378.dat --cpu 1 --keep-tmp --promoter-attI -dt 4000 --calin-threshold 2 --max-attc-size 200 --min-attc-size 40 +# integron_finder 2.0.5 +# cmd: integron_finder /tmp/tmphy8ici_1/files/4/5/6/dataset_456847c3-0e81-4c5c-b3f2-6b14a0da2b45.dat --cpu 1 --keep-tmp --promoter-attI -dt 4000 --calin-threshold 2 --max-attc-size 200 --min-attc-size 40 ID_integron ID_replicon element pos_beg pos_end strand evalue type_elt annotation model type default distance_2attC considered_topology integron_01 ACBA.007.P01_13 Pc_int1 25 51 -1 NA Promoter Pc_1 NA complete Yes NA circ -integron_01 ACBA.007.P01_13 ACBA.007.P01_13_1 55 1014 1 1.9000000000000001e-25 protein intI intersection_tyr_intI complete Yes NA circ +integron_01 ACBA.007.P01_13 ACBA.007.P01_13_1 55 1014 1 1.9e-25 protein intI intersection_tyr_intI complete Yes NA circ integron_01 ACBA.007.P01_13 ACBA.007.P01_13_20 17375 17722 -1 NA protein protein NA complete Yes NA circ integron_01 ACBA.007.P01_13 attc_001 17825 17884 -1 1e-09 attC attC attc_4 complete Yes NA circ integron_01 ACBA.007.P01_13 ACBA.007.P01_13_21 17886 18665 -1 NA protein protein NA complete Yes NA circ