Mercurial > repos > iuc > integron_finder
diff test-data/test10_integrons_table.tsv @ 2:9fdd3e97db8d draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/integron_finder commit 13f722da1a2d95586490e8534b9884abe61ba7cd
| author | iuc |
|---|---|
| date | Tue, 10 Feb 2026 15:53:43 +0000 |
| parents | 2729629d81db |
| children |
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--- a/test-data/test10_integrons_table.tsv Fri Feb 17 18:35:52 2023 +0000 +++ b/test-data/test10_integrons_table.tsv Tue Feb 10 15:53:43 2026 +0000 @@ -1,9 +1,10 @@ -# cmd: integron_finder /tmp/tmp3_ir6t5a/files/c/d/d/dataset_cdd097ee-d7c0-4424-9c3c-3ddd5d20887a.dat --cpu 1 --keep-tmp -dt 4000 --calin-threshold 2 --max-attc-size 200 --min-attc-size 40 --union-integrases --func-annot +# integron_finder 2.0.5 +# cmd: integron_finder /tmp/tmphy8ici_1/files/2/e/b/dataset_2ebb353a-12c6-4a70-b30a-5bd0ab3efdce.dat --cpu 1 --keep-tmp -dt 4000 --calin-threshold 2 --max-attc-size 200 --min-attc-size 40 --union-integrases --func-annot ID_integron ID_replicon element pos_beg pos_end strand evalue type_elt annotation model type default distance_2attC considered_topology -integron_01 ACBA.007.P01_13 ACBA.007.P01_13_1 55 1014 1 1.9000000000000001e-25 protein intI intersection_tyr_intI complete Yes NA circ -integron_01 ACBA.007.P01_13 ACBA.007.P01_13_20 17375 17722 -1 9.799999999999998e-65 protein SMR_qac_E-NCBIFAM NF000276.2 complete Yes NA circ +integron_01 ACBA.007.P01_13 ACBA.007.P01_13_1 55 1014 1 1.9e-25 protein intI intersection_tyr_intI complete Yes NA circ +integron_01 ACBA.007.P01_13 ACBA.007.P01_13_20 17375 17722 -1 9.800000000000001e-65 protein SMR_qac_E-NCBIFAM NF000276.2 complete Yes NA circ integron_01 ACBA.007.P01_13 attc_001 17825 17884 -1 1e-09 attC attC attc_4 complete Yes NA circ -integron_01 ACBA.007.P01_13 ACBA.007.P01_13_21 17886 18665 -1 2.7999999999999994e-183 protein ANT_3pp_AadA1-NCBIFAM NF033126.1 complete Yes NA circ +integron_01 ACBA.007.P01_13 ACBA.007.P01_13_21 17886 18665 -1 2.8e-183 protein ANT_3pp_AadA1-NCBIFAM NF033126.1 complete Yes NA circ integron_01 ACBA.007.P01_13 attc_002 19080 19149 -1 0.0001 attC attC attc_4 complete Yes 1196.0 circ integron_01 ACBA.007.P01_13 ACBA.007.P01_13_22 19090 19749 -1 NA protein protein NA complete Yes NA circ integron_01 ACBA.007.P01_13 attc_003 19618 19726 -1 1.1e-07 attC attC attc_4 complete Yes 469.0 circ