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comparison imagej2_smooth.xml @ 0:f3ec070f1781 draft

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planemo upload commit 378c3ecfbaed0330faf197811d379431b0f9e92c-dirty
author iuc
date Sun, 11 Oct 2015 13:31:38 -0400
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1 <?xml version='1.0' encoding='UTF-8'?>
2 <tool id="imagej2_smooth" name="Smooth" version="@WRAPPER_VERSION@.0">
3 <description></description>
4 <macros>
5 <import>imagej2_macros.xml</import>
6 </macros>
7 <expand macro="fiji_requirements" />
8 <command>
9 <![CDATA[
10 python $__tool_directory__/imagej2_smooth.py
11 --input "$input"
12 --input_datatype $input.ext
13 --jython_script $__tool_directory__/jython_script.py
14 --output_datatype $output.ext
15 --output "$output"
16 ]]>
17 </command>
18 <inputs>
19 <param format="bmp,eps,gif,jpg,pcx,pgm,png,psd,tiff" name="input" type="data" label="Select image"/>
20 </inputs>
21 <outputs>
22 <data name="output" format_source="input" label="${tool.name} on ${on_string}"/>
23 </outputs>
24 <tests>
25 <test>
26 <param name="input" value="blobs.gif" />
27 <output name="output" file="blobs_smooth.gif" compare="sim_size" />
28 </test>
29 </tests>
30 <help>
31
32 **What it does**
33
34 <![CDATA[
35
36 Blurs the image by replacing each pixel with the average of its 3x3 neighborhood.
37
38 ]]>
39
40 </help>
41 <expand macro="fiji_headless_citations" />
42 </tool>