Mercurial > repos > iuc > imagej2_convert_format

comparison imagej2_convert_format.xml @ 4:7a8b05b111f9 draft

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planemo upload commit 18df9e67efd4adafcde4eb9b62cd815e4afe9733-dirty
author iuc
date Wed, 26 Aug 2015 14:37:12 -0400
parents 9a24b7e68010
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3:9a24b7e68010 4:7a8b05b111f9
1 <?xml version='1.0' encoding='UTF-8'?> 1 <?xml version='1.0' encoding='UTF-8'?>
2 <tool id="imagej2_convert_format" name="Convert image format" version="1.0.0"> 2 <tool id="imagej2_convert_format" name="Convert image format" version="@WRAPPER_VERSION@.0">
3 <description>with bioformats</description> 3 <description>with bioformats</description>
4 <macros> 4 <macros>
5 <import>imagej2_macros.xml</import> 5 <import>imagej2_macros.xml</import>
6 </macros> 6 </macros>
7 <expand macro="python_bioformats_104_requirements" /> 7 <expand macro="python_bioformats_requirements" />
8 <command interpreter="python"> 8 <command interpreter="python">
9 <![CDATA[ 9 <![CDATA[
10 imagej2_convert_format.py 10 imagej2_convert_format.py
11 --in_fname "$input" 11 --in_fname "$input"
12 --input_datatype $input.ext 12 --input_datatype $input.ext
13 @max_heap_size_args@
14 --output_datatype $output_datatype 13 --output_datatype $output_datatype
15 --out_fname "$output" 14 --out_fname "$output"
16 ]]> 15 ]]>
17 </command> 16 </command>
18 <inputs> 17 <inputs>
19 <expand macro="max_heap_size_type_conditional" />
20 <param format="bmp,eps,gif,jpg,pcx,pgm,png,psd,tiff" name="input" type="data" label="Select image"/> 18 <param format="bmp,eps,gif,jpg,pcx,pgm,png,psd,tiff" name="input" type="data" label="Select image"/>
21 <param name="output_datatype" type="select" label="Convert to format"> 19 <param name="output_datatype" type="select" label="Convert to format">
22 <option value="jpg" selected="true">jpg</option> 20 <option value="jpg" selected="true">jpg</option>
23 <option value="png">png</option> 21 <option value="png">png</option>
24 <option value="tiff">tiff</option> 22 <option value="tiff">tiff</option>