--- a/imagej2_bunwarpj_raw_transform.py	Tue Aug 04 13:21:24 2015 -0400
+++ b/imagej2_bunwarpj_raw_transform.py	Wed Aug 26 14:38:28 2015 -0400
@@ -15,8 +15,6 @@
 parser.add_argument( '--source_out', help='Output source image' )
 parser.add_argument( '--source_out_datatype', help='Output registered source image format' )
 parser.add_argument( '--jython_script', dest='jython_script', help='Path to the Jython script' )
-parser.add_argument( '--max_heap_size_type', dest='max_heap_size_type', help='Type (default or megabytes) of max_heap_size value' )
-parser.add_argument( '--max_heap_size', dest='max_heap_size', help='Maximum size of the memory allocation pool used by the JVM.' )
 
 args = parser.parse_args()
 
@@ -27,9 +25,6 @@
 target_image_path = imagej2_base_utils.get_input_image_path( tmp_dir, args.target_image, args.target_image_format )
 raw_transformation_path = imagej2_base_utils.get_input_image_path( tmp_dir, args.raw_transformation, 'txt' )
 
-# Set the size of the memory allocation pool used by the JVM.
-memory_size = imagej2_base_utils.get_max_heap_size_value( args.max_heap_size_type, args.max_heap_size )
-
 # Define command response buffers.
 tmp_out = tempfile.NamedTemporaryFile().name
 tmp_stdout = open( tmp_out, 'wb' )
@@ -37,7 +32,7 @@
 tmp_stderr = open( tmp_err, 'wb' )
 
 # Build the command line to apply the raw transformation.
-cmd = imagej2_base_utils.get_base_cmd_bunwarpj( memory_size )
+cmd = imagej2_base_utils.get_base_cmd_bunwarpj( None )
 if cmd is None:
     imagej2_base_utils.stop_err( "bUnwarpJ not found!" )
 cmd += ' -raw_transform'
@@ -60,7 +55,7 @@
 tmp_err = tempfile.NamedTemporaryFile().name
 tmp_stderr = open( tmp_err, 'wb' )
 
-cmd = imagej2_base_utils.get_base_command_imagej2( memory_size, jython_script=args.jython_script )
+cmd = imagej2_base_utils.get_base_command_imagej2( None, jython_script=args.jython_script )
 if cmd is None:
     imagej2_base_utils.stop_err( "ImageJ not found!" )
 cmd += ' %s %s %s' % ( tmp_source_out_tiff_path,