--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/jython_script.py	Fri Jun 19 17:00:07 2015 -0400
@@ -0,0 +1,16 @@
+import sys
+import jython_utils
+from ij import IJ
+
+# Fiji Jython interpreter implements Python 2.5 which does not
+# provide support for argparse.
+
+source_tiff_path = sys.argv[ -3 ]
+source_datatype = sys.argv[ -2 ]
+source_path = sys.argv[ -1 ]
+
+# Save the Registered Source Image.
+registered_source_image = IJ.openImage( source_tiff_path )
+if source_datatype == 'tiff':
+    registered_source_image = jython_utils.convert_before_saving_as_tiff( registered_source_image )
+IJ.saveAs( registered_source_image, source_datatype, source_path )