Mercurial > repos > iuc > hyphy_slac

diff hyphy_slac.xml @ 35:6130cd31dfb9 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit e7a89841d59689e87db592e112f9c8fb5331d954
author iuc
date Thu, 02 Mar 2023 15:05:59 +0000
parents 920e035ce949
children 183cf2baf56e
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--- a/hyphy_slac.xml	Thu Aug 18 13:34:56 2022 +0000
+++ b/hyphy_slac.xml	Thu Mar 02 15:05:59 2023 +0000
@@ -1,5 +1,4 @@
-<?xml version="1.0"?>
-<tool id="hyphy_slac" name="HyPhy-SLAC" version="@TOOL_VERSION@+galaxy1" profile="19.09">
+<tool id="hyphy_slac" name="HyPhy-SLAC" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
     <description>Single Likelihood Ancestor Counting</description>
     <macros>
         <import>macros.xml</import>
@@ -32,7 +31,14 @@
         <test>
             <param name="input_file" ftype="fasta" value="absrel-in1.fa"/>
             <param name="input_nhx" ftype="nhx" value="absrel-in1.nhx"/>
-            <output name="slac_output" file="slac-out1.json" compare="sim_size"/>
+            <output name="slac_output">
+                <assert_contents>
+                    <has_size value="280000" delta="8000"/>
+                    <has_text text="tested"/>
+                    <has_text text="sample-median"/>
+                    <has_text text="sample-97.5"/>
+                </assert_contents>
+            </output>
         </test>
     </tests>
     <help><![CDATA[