Mercurial > repos > iuc > humann2_join_tables

diff humann2_join_tables.xml @ 1:c366177747bc draft
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 6753a2c0fec9222f5977cab43a855c63fa9f7bee
author: iuc
date: Tue, 01 Aug 2017 07:52:36 -0400
parents: 99c20b588154
children: edb2b396611d
--- a/humann2_join_tables.xml	Mon Mar 13 12:26:33 2017 -0400
+++ b/humann2_join_tables.xml	Tue Aug 01 07:52:36 2017 -0400
@@ -6,17 +6,14 @@
     <expand macro="requirements"/>
     <expand macro="version"/>
     <command detect_errors="exit_code"><![CDATA[
-        mkdir tmp_dir
-
-        && 
-
-        #for $table in $input_table
-            cp '$table' 'tmp_dir' &&
-        #end for
- 
-        humann2_join_tables
-            -i 'tmp_dir'
-            -o '$joined_table'          
+mkdir tmp_dir
+&&
+#for $table in $input_table
+    cp '$table' 'tmp_dir' &&
+#end for
+humann2_join_tables
+    -i 'tmp_dir'
+    -o '$joined_table'
     ]]></command>
     <inputs>
         <param name="input_table" type="data" format="tsv,tabular" multiple="true" label="Gene/pathway table"/>