Mercurial > repos > iuc > hmmer_hmmfetch
diff test-data/globins.tblout @ 0:0fa9130897ff draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 86a44bf15f8184b690ee1af98aa1d5f86ad2fb3d-dirty
| author | iuc |
|---|---|
| date | Fri, 02 Oct 2015 13:40:40 -0400 |
| parents | |
| children | bbc387f18a71 |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/globins.tblout Fri Oct 02 13:40:40 2015 -0400 @@ -0,0 +1,15 @@ +# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- +# target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target +#------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- +sp|P02185|MYG_PHYCD - globins4 - 1.8e-70 222.7 3.2 2e-70 222.6 3.2 1.0 1 0 0 1 1 1 1 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2 +sp|P02024|HBB_GORGO - globins4 - 9.2e-69 217.2 0.1 1e-68 217.0 0.1 1.0 1 0 0 1 1 1 1 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2 +# +# Program: hmmsearch +# Version: 3.1b1 (May 2013) +# Pipeline mode: SEARCH +# Query file: test-data/globins4.hmm +# Target file: test-data/uniprot_matches.fasta +# Option settings: hmmsearch --tblout test-data/globins.tblout --domtblout test-data/globins.domtblout --pfamtblout test-data/globins.pfamtblout --notextw -E 10 --domE 10 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 2 test-data/globins4.hmm test-data/uniprot_matches.fasta +# Current dir: /home/users/cpt/cpt/esr/Projects/galaxy/tools-iuc/tools/hmmer +# Date: Mon Feb 9 14:36:36 2015 +# [ok]