Mercurial > repos > iuc > hmmer_hmmbuild
diff test-data/MADE1.out.domtblout @ 0:648d9e133324 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 86a44bf15f8184b690ee1af98aa1d5f86ad2fb3d-dirty
| author | iuc |
|---|---|
| date | Fri, 02 Oct 2015 13:40:09 -0400 |
| parents | |
| children | 9a0a34e55dee |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/MADE1.out.domtblout Fri Oct 02 13:40:09 2015 -0400 @@ -0,0 +1,18 @@ +# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord +# target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target +#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- +MADE1 DF0000629.2 80 humanchr1/239220001-239550000 - 330000 7.1e-18 51.5 28.5 1 5 1 1 -4.3 0.1 30 54 80044 80068 80030 80073 0.80 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon +MADE1 DF0000629.2 80 humanchr1/239220001-239550000 - 330000 7.1e-18 51.5 28.5 2 5 1 1 -6.7 3.3 13 71 154012 154072 154011 154076 0.75 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon +MADE1 DF0000629.2 80 humanchr1/239220001-239550000 - 330000 7.1e-18 51.5 28.5 3 5 2e-10 2e-10 27.6 0.7 1 44 174456 174514 174456 174577 0.62 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon +MADE1 DF0000629.2 80 humanchr1/239220001-239550000 - 330000 7.1e-18 51.5 28.5 4 5 2e-12 2e-12 34.0 0.7 2 80 302388 302466 302387 302466 0.86 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon +MADE1 DF0000629.2 80 humanchr1/239220001-239550000 - 330000 7.1e-18 51.5 28.5 5 5 0.011 0.011 2.8 0.7 27 75 304060 304107 304021 304109 0.61 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon +# +# Program: hmmscan +# Version: 3.1b1 (May 2013) +# Pipeline mode: SCAN +# Query file: test-data/dna_target.fa +# Target file: test-data/MADE1.hmm +# Option settings: hmmscan --tblout tblout --domtblout domtblout --pfamtblout pfamtblout test-data/MADE1.hmm test-data/dna_target.fa +# Current dir: /home/users/cpt/cpt/esr/Projects/galaxy/tools-iuc/tools/hmmer +# Date: Tue Feb 10 14:40:35 2015 +# [ok]