Mercurial > repos > iuc > hmmer_alimask

comparison alimask.xml @ 10:c8ba8b5bf0b8 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit e0d4688a59e6eeba33adcfe803ac43d0bc2863e7"
author iuc
date Tue, 31 Aug 2021 08:44:40 +0000
parents 0f13a2dc6184
children
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9:6f7efab71c30 10:c8ba8b5bf0b8
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool id="hmmer_alimask" name="alimask" version="@TOOL_VERSION@"> 2 <tool id="hmmer_alimask" name="alimask" version="@TOOL_VERSION@">
3 <description>append modelmask line to a multiple sequence alignments</description> 3 <description>append modelmask line to a multiple sequence alignments</description>
4 <macros> 4 <expand macro="bio_tools"/>
5 <import>macros.xml</import> 5 <macros>
6 </macros> 6 <import>macros.xml</import>
7 <expand macro="requirements"/> 7 </macros>
8 <expand macro="stdio"/> 8 <expand macro="requirements"/>
9 <command><![CDATA[ 9 <expand macro="stdio"/>
10 <command><![CDATA[
10 alimask 11 alimask
11 12
12 #if $range_type.range_type_select == "model": 13 #if $range_type.range_type_select == "model":
13 #set range = ','.join( [ "%s-%s" % (str($range.modelrangestart), str($range.modelrangeend)) for $range in $range_type.modelranges]) 14 #set range = ','.join( [ "%s-%s" % (str($range.modelrangestart), str($range.modelrangeend)) for $range in $range_type.modelranges])
14 --modelrange $range 15 --modelrange $range