Mercurial > repos > iuc > gff_to_prot

diff convert_gff.xml @ 2:5b78f251c69f draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transit/ commit 4730eda34222a432a14bf1d1dd090b15e61a494c-dirty
author iuc
date Tue, 12 Mar 2019 15:00:26 -0400
parents f6c407e41a33
children a6aa24fe733c
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--- a/convert_gff.xml	Thu Feb 28 09:04:48 2019 -0500
+++ b/convert_gff.xml	Tue Mar 12 15:00:26 2019 -0400
@@ -1,6 +1,9 @@
 <?xml version="1.0"?>
 <tool id="gff_to_prot" name="Convert GFF3" version="1.0.0">
     <description>to prot_table for TRANSIT</description>
+    <macros>
+        <import>macros.xml</import>
+    </macros>
     <command detect_errors="exit_code">$__tool_directory__/gff_to_prot.py '$input' '$output'</command>
     <inputs>
         <param name="input" type="data" format="gff3" label="GenBank GFF file" />
@@ -14,4 +17,19 @@
             <output name="output" file="gff_to_prot-out1.txt" />
         </test>
     </tests>
+
+    <help>
+<![CDATA[
+.. class:: infomark
+
+
+**What it does**
+
+-------------------
+
+Convert Gff3 files coming from Genbank in prot_table file that can be used as an input for TRANSIT tools.
+
+]]></help>
+    <expand macro="citations" />
+
 </tool>