Mercurial > repos > iuc > gfa_to_fa

diff gfa_to_fa.xml @ 1:bb94cb83d936 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gfa_to_fa commit 518c9f5ae1d6dfddd26bc37107e06f269147ed55"
author iuc
date Tue, 21 Jan 2020 23:55:16 +0000
parents 48408c58c6e6
children 43f7a0890015
line wrap: on
line diff
--- a/gfa_to_fa.xml	Wed Jun 19 06:40:02 2019 -0400
+++ b/gfa_to_fa.xml	Tue Jan 21 23:55:16 2020 +0000
@@ -1,4 +1,4 @@
-<tool id="gfa_to_fa" name="GFA to FASTA" version="0.1.0">
+<tool id="gfa_to_fa" name="GFA to FASTA" version="0.1.1">
     <description>Convert Graphical Fragment Assembly files to FASTA format </description>
     <command detect_errors="exit_code"><![CDATA[
 cat '$in_gfa' | python '$convert' > '$out_fa'
@@ -10,8 +10,8 @@
 for line in sys.stdin:
     if line.startswith("S"):
         l,h,s,x = line.strip().split()
-	print(">" + h)
-	print(s)
+        print(">" + h)
+        print(s)
         ]]></configfile>
     </configfiles>
     <inputs>