Mercurial > repos > iuc > gemini_roh

diff gemini_roh.xml @ 5:4c21f703d997 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gemini commit 283362494058ed64143b1f27afb447b8a1cb4313
author iuc
date Fri, 14 Dec 2018 12:39:12 -0500
parents 54dfbb964091
children b1d595a6e582
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line diff
--- a/gemini_roh.xml	Sat Dec 08 10:31:37 2018 -0500
+++ b/gemini_roh.xml	Fri Dec 14 12:39:12 2018 -0500
@@ -55,11 +55,15 @@
     </outputs>
     <tests>
         <test>
-            <param name="infile" value="gemini_burden_input.db" ftype="gemini.sqlite" />
+            <param name="infile" value="gemini_load_result1.db" ftype="gemini.sqlite" />
             <param name="min_snps" value="3" />
             <param name="min_size" value="10" />
             <param name="min_total_depth" value="0" />
-            <output name="outfile" file="gemini_roh_result.tabular" />
+            <output name="outfile">
+                <assert_contents>
+                    <has_line_matching expression="chrom&#009;start&#009;end&#009;.*run_length.*" />
+                </assert_contents>
+            </output>
         </test>
     </tests>
     <help><![CDATA[