Mercurial > repos > iuc > gemini_qc

diff gemini_qc.xml @ 3:929c242be49a draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gemini commit 283362494058ed64143b1f27afb447b8a1cb4313
author iuc
date Fri, 14 Dec 2018 12:23:53 -0500
parents 0dfc99ffd8d4
children 22d275913efd
line wrap: on
line diff
--- a/gemini_qc.xml	Sat Dec 08 10:26:57 2018 -0500
+++ b/gemini_qc.xml	Fri Dec 14 12:23:53 2018 -0500
@@ -27,9 +27,16 @@
     </outputs>
     <tests>
         <test>
-            <param name="infile" value="gemini_amend_input.db" ftype="gemini.sqlite" />
-            <param name="chrom" value="chrX" ftype="gemini.sqlite" />
-            <output name="outfile" file="gemini_qc_result.tabular" />
+            <param name="infile" value="gemini_load_result1.db" ftype="gemini.sqlite" />
+            <!-- Testing needs to be done on a chromsome that exists
+            in the test database even if that has little biological meaning
+            -->
+            <param name="chrom" value="chr1" ftype="gemini.sqlite" />
+            <output name="outfile">
+                <assert_contents>
+                    <has_line_matching expression="sample&#009;sex&#009;.*" />
+                </assert_contents>
+            </output>
         </test>
     </tests>
     <help>