Mercurial > repos > iuc > gemini_pathways

diff gemini_macros.xml @ 2:71c51883304f draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/gemini commit 2f3c5976d08f63f05e1d9726343d03a478dc035b-dirty
author iuc
date Tue, 16 Feb 2016 05:55:52 -0500
parents 668b63ef3402
children 1e10a153192d
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line diff
--- a/gemini_macros.xml	Tue Dec 29 11:07:23 2015 -0500
+++ b/gemini_macros.xml	Tue Feb 16 05:55:52 2016 -0500
@@ -60,6 +60,7 @@
                     <option value="alt">alt</option>
                     <option value="impact">impact</option>
                     <option value="impact_severity">impact_severity</option>
+                    <option value="max_aaf_all">alternative allele frequency</option>
                 </param>
             </when>
         </conditional>
@@ -111,10 +112,8 @@
     </xml>
 
     <xml name="min_sequence_depth">
-        <param name="d" type="integer" value="0" label="The minimum aligned sequence depth (genotype DP) required for each sample"
-                help="default: 0 (-d)">
-            <validator type="in_range" min="0"/>
-        </param>
+        <param name="d" type="integer" value="0" min="0" label="The minimum aligned sequence depth (genotype DP) required for each sample"
+                help="default: 0 (-d)" />
     </xml>
 
     <xml name="min_gq">
@@ -124,11 +123,9 @@
     </xml>
 
     <xml name="gt_pl_max">
-        <param name="gt_pl_max" type="integer" value="-1" label="The maximum phred-scaled genotype likelihod (PL) allowed for each sample in a family" help="default: -1 (not set) (--gt-pl-max)">
-            <validator type="in_range" min="-1"/>
-        </param>
+        <param name="gt_pl_max" type="integer" value="-1" min="-1" label="The maximum phred-scaled genotype likelihod (PL) allowed for each sample in a family" help="default: -1 (not set) (--gt-pl-max)" />
     </xml>
-    <token name="@VERSION@">0.18.0</token>
+    <token name="@VERSION@">0.18.1</token>
 
     <xml name="citations">
         <citations>