Mercurial > repos > iuc > gemini_pathways

diff gemini_pathways.xml @ 5:1e736aee3c8c draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gemini commit 283362494058ed64143b1f27afb447b8a1cb4313
author iuc
date Fri, 14 Dec 2018 12:37:34 -0500
parents 1e10a153192d
children 228263fd9c72
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line diff
--- a/gemini_pathways.xml	Sat Dec 08 10:22:17 2018 -0500
+++ b/gemini_pathways.xml	Fri Dec 14 12:37:34 2018 -0500
@@ -36,9 +36,13 @@
     </outputs>
     <tests>
         <test>
-            <param name="infile" value="gemini_burden_input.db" ftype="gemini.sqlite" />
+            <param name="infile" value="gemini_load_result1.db" ftype="gemini.sqlite" />
             <param name="ensembl" value="68" />
-            <output name="outfile" file="gemini_pathways_result.tabular" />
+            <output name="outfile">
+                <assert_contents>
+                    <has_line_matching expression="chrom&#009;start&#009;end&#009;.*pathway.*" />
+                </assert_contents>
+            </output>
         </test>
     </tests>
     <help>