Mercurial > repos > iuc > gemini_mendel_errors

comparison gemini_mendel_errors.xml @ 1:453eb01e00e7 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gemini commit e4dce25c8dbeffca62c402f74ca733ddc7a6091b
author iuc
date Fri, 07 Dec 2018 12:48:15 -0500
parents 886fdfe90b01
children 58899bab0641
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0:886fdfe90b01 1:453eb01e00e7
1 <tool id="gemini_@BINARY@" name="GEMINI @BINARY@" version="@VERSION@.0"> 1 <tool id="gemini_@BINARY@" name="GEMINI @BINARY@" version="@VERSION@.1">
2 <description>Identify candidate violations of Mendelian inheritance</description> 2 <description>Identify candidate violations of Mendelian inheritance</description>
3 <macros> 3 <macros>
4 <import>gemini_macros.xml</import> 4 <import>gemini_macros.xml</import>
5 <token name="@BINARY@">mendel_errors</token> 5 <token name="@BINARY@">mendel_errors</token>
6 </macros> 6 </macros>
7 <expand macro="requirements" /> 7 <expand macro="requirements" />
8 <expand macro="stdio" /> 8 <expand macro="stdio" />
9 <expand macro="version_command" /> 9 <expand macro="version_command" />
10 <command> 10 <command>
11 <![CDATA[ 11 <![CDATA[
12 @PROVIDE_ANNO_DATA@
13
12 gemini @BINARY@ 14 gemini @BINARY@
13 15
14 #if $report.report_selector != 'all': 16 @COLUMN_SELECT@
15 --columns "${report.columns}"
16 #end if
17 17
18 @CMDLN_SQL_FILTER_FILTER_OPTION@ 18 @CMDLN_SQL_FILTER_FILTER_OPTION@
19 19
20 #if int($min_kindreds) > 0: 20 #if int($min_kindreds) > 0:
21 --min-kindreds $min_kindreds 21 --min-kindreds $min_kindreds