Mercurial > repos > iuc > gatk2

diff haplotype_caller.xml @ 5:c2645201ffae draft

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Uploaded
author iuc
date Tue, 11 Mar 2014 07:42:09 -0400
parents e67da4f2c9bf
children b80301676614
line wrap: on
line diff
--- a/haplotype_caller.xml	Sat Jan 18 07:00:26 2014 -0500
+++ b/haplotype_caller.xml	Tue Mar 11 07:42:09 2014 -0400
@@ -158,7 +158,7 @@
           <!-- load the available annotations from an external configuration file, since additional ones can be added to local installs -->
           <options from_data_table="gatk2_annotations">
             <filter type="multiple_splitter" column="tools_valid_for" separator=","/>
-            <filter type="static_value" value="UnifiedGenotyper" column="tools_valid_for"/>
+            <filter type="static_value" value="HaplotypeCaller" column="tools_valid_for"/>
           </options>
         </param>
         <repeat name="additional_annotations" title="Additional annotation" help="-A,--annotation &amp;lt;annotation&amp;gt;">
@@ -191,7 +191,7 @@
           <!-- load the available annotations from an external configuration file, since additional ones can be added to local installs -->
           <options from_data_table="gatk2_annotations">
             <filter type="multiple_splitter" column="tools_valid_for" separator=","/>
-            <filter type="static_value" value="UnifiedGenotyper" column="tools_valid_for"/>
+            <filter type="static_value" value="HaplotypeCaller" column="tools_valid_for"/>
           </options>
         </param>