Mercurial > repos > iuc > funannotate_annotate

diff funannotate_annotate.xml @ 8:51ca9670dcd1 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/funannotate commit 8341270dd36185ebf59d15282bc79f1215e936a4
author iuc
date Fri, 07 Mar 2025 22:31:16 +0000
parents f6482e570d32
children
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--- a/funannotate_annotate.xml	Wed Jun 26 09:37:48 2024 +0000
+++ b/funannotate_annotate.xml	Fri Mar 07 22:31:16 2025 +0000
@@ -11,9 +11,10 @@
     <command><![CDATA[
 ## Needed by some subprocess invoked internally
 ## https://github.com/nextgenusfs/funannotate/issues/905
-export FUNANNOTATE_DB='$database.fields.path'
+export FUNANNOTATE_DB='$database.fields.path' &&
 
-&&
+## show detailed info about the reference DB on stdout
+funannotate database &&
 
 funannotate annotate
 
@@ -106,7 +107,7 @@
                 <column name="value" index="0" />
                 <column name="name" index="1" />
                 <column name="path" index="3" />
-                <filter type="sort_by" column="0" />
+                <filter type="sort_by" column="0" reverse_sort_order="true"/>
                 <filter type="static_value" column="2" value="1.0" />
             </options>
         </param>