# HG changeset patch
# User iuc
# Date 1638005796 0
# Node ID 2454ab2d95cea49dfd8886dfddbad08a889cf12d
# Parent  e3fca040d79d9c0e6fcc80d0488eace1903c397a
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/flair commit 116d8aa50dda2eb771b71fa5e3ed8f0f35e2821c"

diff -r e3fca040d79d -r 2454ab2d95ce flair_collapse.xml
--- a/flair_collapse.xml	Fri Apr 09 21:13:37 2021 +0000
+++ b/flair_collapse.xml	Sat Nov 27 09:36:36 2021 +0000
@@ -1,4 +1,4 @@
-<tool id="flair_collapse" name="FLAIR collapse" version="@TOOL_VERSION@+galaxy0" profile="20.01">
+<tool id="flair_collapse" name="FLAIR collapse" version="@TOOL_VERSION@+galaxy1" profile="20.01">
     <description>defines high-confidence isoforms from flair-corrected reads</description>
 
     <macros>
@@ -48,7 +48,7 @@
 #if str($additional_options.select_filter):
     -e str($additional_options.select_filter)
 #end if
-
+--quality $additional_options.mapq
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 ## END ##
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