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comparison filter_tabular.xml @ 15:c980ca86636b draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit dd35055c76d86fe98985b5825c1751efb8208242
author iuc
date Thu, 27 Jun 2024 17:22:58 +0000
parents 26b66c3c5504
children
comparison
equal deleted inserted replaced
14:7ddbba636f33 15:c980ca86636b
1 <tool id="filter_tabular" name="Filter Tabular" version="3.3.0"> 1 <tool id="filter_tabular" name="Filter Tabular" version="3.3.1">
2 <description></description> 2 <description></description>
3 3
4 <macros> 4 <macros>
5 <import>macros.xml</import> 5 <import>macros.xml</import>
6 </macros> 6 </macros>
14 ]]></command> 14 ]]></command>
15 <configfiles> 15 <configfiles>
16 <configfile name="filter_json"> 16 <configfile name="filter_json">
17 #import json 17 #import json
18 #set $dataset_name = $input.element_identifier 18 #set $dataset_name = $input.element_identifier
19 #set $table=$input
19 @LINEFILTERS@ 20 @LINEFILTERS@
20 #if $input_filters:
21 #echo $json.dumps($input_filters) 21 #echo $json.dumps($input_filters)
22 #end if
23 </configfile> 22 </configfile>
24 </configfiles> 23 </configfiles>
25 <inputs> 24 <inputs>
26 <param name="input" type="data" format="tabular" label="Tabular Dataset to filter"/> 25 <param name="input" type="data" format="tabular" label="Tabular Dataset to filter"/>
27 <param name="comment_char" type="boolean" truevalue="--comment_char '#'" falsevalue="" checked="true" label="exclude lines starting with #"/> 26 <param name="comment_char" type="boolean" truevalue="--comment_char '#'" falsevalue="" checked="true" label="exclude lines starting with #"/>
164 <param name="filter_type" value="append_dataset_name"/> 163 <param name="filter_type" value="append_dataset_name"/>
165 </conditional> 164 </conditional>
166 </repeat> 165 </repeat>
167 <output name="output" file="filtered_IEDB.tsv"/> 166 <output name="output" file="filtered_IEDB.tsv"/>
168 </test> 167 </test>
168 <test>
169 <param name="input" ftype="tabular" value="math_input.tsv"/>
170 <param name="comment_char" value="False"/>
171 <repeat name="linefilters">
172 <conditional name="filter">
173 <param name="filter_type" value="skip"/>
174 <param name="skiplines" value=""/>
175 </conditional>
176 </repeat>
177 <output name="output" file="math_input.tsv"/>
178 </test>
169 </tests> 179 </tests>
170 <help><![CDATA[ 180 <help><![CDATA[
171 ============== 181 ==============
172 Filter Tabular 182 Filter Tabular
173 ============== 183 ==============