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comparison featurecounts.xml @ 1:94fdae43f062 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/featurecounts commit 74e6b17b1a94bc6de47d7cbcf9548a9367b02d56
author iuc
date Fri, 23 Sep 2016 10:06:34 -0400
parents 8e70555968a1
children 4d0763d3eb93
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0:8e70555968a1 1:94fdae43f062
432 - http://genome.ucsc.edu/FAQ/FAQformat.html#format3 432 - http://genome.ucsc.edu/FAQ/FAQformat.html#format3
433 - http://www.ensembl.org/info/website/upload/gff.html 433 - http://www.ensembl.org/info/website/upload/gff.html
434 434
435 Output format 435 Output format
436 ------------- 436 -------------
437 FeatureCounts produces a table containing the counted reads, per gene, per row. Optionally the last column can be set to be the effective gene-length. These tables are compatible with the DESeq2 Galaxy wrapper by IUC. 437 FeatureCounts produces a table containing counted reads, per gene, per row. Optionally the last column can be set to be the effective gene-length. These tables are compatible with the DESeq2 Galaxy wrapper by IUC. Column names are added as metadata object.
438 ]]></help> 438 ]]></help>
439 <citations> 439 <citations>
440 <citation type="doi">10.1093/bioinformatics/btt656</citation> 440 <citation type="doi">10.1093/bioinformatics/btt656</citation>
441 </citations> 441 </citations>
442 </tool> 442 </tool>