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comparison featurecounts.xml @ 22:819225afd6b3 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/featurecounts commit c54a74999bc36a5046d23d8249c69cd7f2fb1fb2
author iuc
date Mon, 07 Jan 2019 03:41:10 -0500
parents d4d69c4d0780
children 944deba3eb6a
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21:d4d69c4d0780 22:819225afd6b3
1 <tool id="featurecounts" name="featureCounts" version="1.6.3+galaxy1" profile="16.04"> 1 <tool id="featurecounts" name="featureCounts" version="1.6.3+galaxy2" profile="16.04">
2 <description>Measure gene expression in RNA-Seq experiments from SAM or BAM files.</description> 2 <description>Measure gene expression in RNA-Seq experiments from SAM or BAM files.</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="1.6.3">subread</requirement> 4 <requirement type="package" version="1.6.3">subread</requirement>
5 <requirement type="package" version="1.9">samtools</requirement> 5 <requirement type="package" version="1.9">samtools</requirement>
6 <requirement type="package" version="3.0.5">paste</requirement> 6 <requirement type="package" version="8.30">coreutils</requirement>
7 </requirements> 7 </requirements>
8 8
9 <version_command>featureCounts -v 2&gt;&amp;1 | grep .</version_command> 9 <version_command>featureCounts -v 2&gt;&amp;1 | grep .</version_command>
10 <command detect_errors="exit_code"><![CDATA[ 10 <command detect_errors="exit_code"><![CDATA[
11 11