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comparison fastk.xml @ 4:b7b4d73c7f66 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastk commit 2df03448c35339ea02f112abb0d0f07b5c41d93e
author iuc
date Mon, 10 Feb 2025 19:29:58 +0000
parents b446c2f40b60
children 1a644dbd5717
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3:dfd9825ceb31 4:b7b4d73c7f66
1 <tool id="fastk_fastk" name="FastK" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="23.2"> 1 <tool id="fastk_fastk" name="FastK" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="23.2">
2 <description>A k-mer counter for high-quality assembly datasets</description> 2 <description>A k-mer counter for high-quality assembly datasets</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="xrefs"/>
6 <expand macro="requirements" /> 7 <expand macro="requirements" />
7 <command detect_errors="exit_code"><![CDATA[ 8 <command detect_errors="exit_code"><![CDATA[
8 mkdir -p ktabfiles && 9 mkdir -p ktabfiles &&
9 #if $infile.is_of_type("fastq"): 10 #if $infile.is_of_type("fastq"):
10 #set INPUTFILE="input.fastq" 11 #set INPUTFILE="input.fastq"