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annotate test-data/S.flexneri_2.fasta @ 0:696d11a69c84 draft default tip

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"planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
author iuc
date Tue, 18 Feb 2020 20:58:26 +0000
parents
children
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0
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
1 >NC_004337.2 Shigella flexneri 2a str. 301 chromosome, complete genome
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
2 AGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
3 GTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGAC
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
4 AGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
5 AACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTTCGACCAAAGGT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
6 AACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGAACGTTTTCTGCGTGTTGCCGA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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7 TATTCTGGAAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCCTCTCTGCCCCCGCCAAAATCACCAACCACCTGGTGG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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8 CGATGATTGAAAAAACCATTAGCGGCCAGGATGCTTTACCCAATATCAGCGATGCCGAACGTATTTTTGCCGAACTTTTG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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9 ACGGGACTCGCCGCCGCCCAGCCGGGGTTCCCGCTGGCGCAATTGAAAACTTTCGTCGATCAGGAATTTGCCCAAATAAA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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10 ACATGTCCTGCATGGCATTAGTTTGTTGGGGCAGTGCCCGGATAGCATCAACGCTGCGCTGATTTGCCGTGGCGAGAAAA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
11 TGTCGATCGCCATTATGGCCGGCGTGTTAGAAGCGCGTGGTCACAACGTTACCGTTATCGATCCGGTCGAAAAACTGCTG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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12 GCAGTGGGGCATTACCTCGAATCTACCGTCGATATTGCTGAGTCCACCCGCCGTATTGCGGCAAGCCGCATTCCGGCTGA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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13 TCACATGGTGTTGATGGCAGGTTTCACCGCCGGTAATGAAAAAGGCGAACTGGTGGTGCTTGGACGTAACGGTTCCGACT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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14 ACTCCGCGGCGGTGCTGGCTGCCTGTTTACGCGCCGATTGTTGCGAGATTTGGACGGACGTTGACGGGGTCTATACCTGC
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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15 GACCCGCGTCAGGTGCCCGATGCGAGGTTGTTGAAGTCGATGTCCTACCAGGAAGCGATGGAGCTTTCCTACTTCGGCGC
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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16 TAAAGTTCTTCACCCCCGCACCATTACCCCCATCGCCCAGTTCCAGATCCCTTGCCTGATTAAAAATACCGGAAATCCTC
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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17 AAGCACCAGGTACGCTCATTGGTGCCAGCCGTGATGAAGACGAATTACCGGTCAAGGGCATTTCCAATCTGAATAACATG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
18 GCAATGTTCAGCGTTTCCGGCCCGGGGATGAAAGGGATGGTTGGCATGGCGGCGCGCGTCTTTGCTGCAATGTCACGCGC
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
19 CCGTATTTCCGTGGTGCTGATTACGCAATCATCTTCCGAATACAGTATCAGTTTCTGCGTTCCACAAAGCGACTGTGTGC
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
20 GAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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21 CTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
22 CGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
23 CCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTGATTGGCGTCGGTGGC
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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24 GTTGGCGGTGCGCTGCTGGAGCAACTGAAGCGTCAGCAAAGCTGGCTGAAGAATAAACATATCGACTTACGTGTCTGCGG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
25 CGTTGCCAACTCGAAGGCTCTGCTCACTAGTGTGCATGGCCTTAATCTGGAAAACTGGCAGGAAGAACTTGCACAAGCCA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
26 AAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACC
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
27 TCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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28 CACCTCGTCGATGGATTACTATCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
29 TTGGGGCTGGATTACCGGTTATTGAGAACCTGCAAAATCTGCTCAATGCAGGTGATGAATTGGTGAAGTTCTCCGGCATT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
30 CTTTCAGGTTCGCTTTCTTATATCTTCGGCAAGTTAGACGAAGGCATGAGTTTCTCCGAGGCGACCACGCTGGCGCGGGA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
31 AATGGGTTATACCGAACCGGACCCGCGAGATGATCTTTCTGGTATGGATGTGGCGCGTAAACTATTGATTCTCGCTCGTG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
32 AAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTGCCCGCAGAGTTTAACGCCGAGGGTGATGTT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
33 GCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGCCGCGCGCGTGGCGAAGGCCCGTGATGAAGGAAAAGT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
34 TTTGCGCTATGTTGGCAATATTGATGAAGATGGTGTCTGCCGCGTGAAGATTGCCGAAGTGGATGGGAATGATCCGCTGT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
35 TCAAAGTGAAAAATGGCGAAAACGCCCTGGCCTTTTATAGCCACTATTATCAGCCGCTGCCGTTGGTGCTGCGCGGATAT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
36 GGTGCGGGCAATGACGTTACCGCTGCCGGTGTCTTTGCCGATCTGCTACGTACCCTCTCATGGAAGTTAGGAGTCTGACA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
37 TGGTTAAAGTTTATGCCCCGGCTTCCAGTGCCAATATGAGCGTCGGGTTTGATGTGCTCGGGGCGGCGGTGGCACCCGTT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
38 GATGGTGCATTGCTCGGAGATGTAGTCACGGTTGAGGCGGCAGAGACATTCAGTCTCAACAACCTCGGACGCTTTGCCGA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
39 TAAGCTGCCGTCAGAACCACGGGAAAATATCGTTTATCAGTGCTGGGAGCGTTTTTGCCAGGAGCTTGGCAAGCAAATTC
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
40 CAGTGGCGATGACTCTGGAAAAGAATATGCCGATCGGTTCGGGCTTAGGCTCCAGCGCCTGTTCGGTGGTCGCGGCGCTG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
41 ATGGCGATGAATGAACACTGCGGCAAGCCGCTTAATGACACTCGTTTGCTGGCTTTGATGGGCGAGCTGGAAGGACGTAT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
42 CTCCGGCAGCATTCATTACGACAACGTGGCACCGTGTTTTCTTGGTGGTATGCAGTTGATGATCGAAGAAAACGACATCA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
43 TCAGCCAGCAAGTGCCAGGGTTTGATGAGTGGCTGTGGGTGCTGGCGTATCCGGGAATTAAAGTCTCGACGGCAGAAGCC
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
44 CGGGCTATTTTACCGGCGCAGTATCGCCGCCAGGATTGCATTGCGCACGGGCGACATCTGGCTGGCTTCATTCACGCCTG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
45 CTATTCCCGTCAGCCTGAGCTTGCCGCGAAGCTGATGAAAGATGTTATCGCTGAACCCTACCGTGAACGGTTACTGCCTG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
46 GCTTCCGGCAGGCGCGGCAGGCGGTCGCGGAAATCGGCGCGGTAGCGAGCGGTATCTCCGGCTCCGGCCCGACCTTGTTC
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
47 GCTCTATGTGACAAGCCGGATACCGCCCAGCGCGTTGCCGACTGGTTGGGTAAGAACTACCTGCAAAATCAGGAAGGTTT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
48 TGTTCATATTTGCCGGCTGGATACGGCGGGCGCACGAGTACTGGAAAACTAAATGAAACTCTACAATCTGAAAGATCACA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
49 ACGAGCAGGTCAGCTTTGCGCAAGCCGTAACCCAGGGGTTGGGCAAAAATCAGGGGCTGTTTTTTCCGCACGACCTGCCG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
50 GAATTCAGCCTGACTGAAATTGATGAGATGCTGAAGCTGGATTTTGTCACCCGCAATGCGAAGATCCTCTCGGCGTTTAT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
51 TGGTGATGAAATCCCACAGGAAATCCTGGAAGAGCGCGTGCGCGCGGCGTTTGCCTTCCCGGCTCCGGTCGCCAATGTTG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
52 AAAGCGATGTCGGTTGTCTGGAATTGTTCCACGGGCCAACGCTGGCATTTAAAGATTTCGGCGGTCGCTTTATGGCACAA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
53 ATGCTGACCCATATTGCGGATGATAAGCCAGTGACCATTCTGACCGCGACCTCCGGTGATACCGGAGCTGCAGTGGCTCA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
54 TGCTTTCTACGGTTTGCCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
55 TCTGTACGTTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
56 TTTGATGATGAAGAACTGAAAGTGGCGCTGGGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGAT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
57 TTGCTACTACTTTGAAGCTGTTGCGCAGCTGCCGCAGGAGGCGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
58 TCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCATTCGGTCTGCCGGTGAAACGTTTTATTGCTGCGACCAACGTGAAC
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
59 GATACCGTGCCACGTTTCCTGCACGACGGTCAGTGGTCACCCAAAGCGACTCAGGCGACGTTATCCAACGCGATGGACGT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
60 GAGTCAGCCGAACAACTGGCCGCGTGTGGAAGAGTTGTTCCGCCGCAAAATCTGGCAACTGAAAGAGCTGGGTTATGCAG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
61 CCGTGGATGATGAAACCACGCAACAGACAATGCGTGAGTTAAAAGAACTGGGCTACACCTCGGAGCCGCACGCTGCCGTA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
62 GCGTATCGTGCGCTGCGTGACCAGTTGAATCCAGGCGAATATGGCTTGTTCCTCGGCACCGCGCATCCGGCGAAATTTAA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
63 AGAGAGCGTGGAAGCGATTCTCGGTGAAACGTTGGATCTGCCAAAAGAGCTGGCAGAACGTGCTGATTTACCCTTGCTTT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
64 CACATAATCTGCCCGCCGATTTTTCTGCGTTGCGTAAATTGATGATGAATCATCAGTAAAATCTATTCATTATCTCAATC
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
65 AGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAACGACAGGGAAAAAGGAGAAATTA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
66 TCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGAATAACAACCGTCGTTCTCATCGCGTAATCTCCGGATATCGA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
parents:
diff changeset
67 CCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTC
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
68 GCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
69 CTATTACTGGGATGGAGGTCACTGGCGCGACCACGGCTGGTGGAAACAACATTATGAATGGCGAGGCAATCGCTGGCACC
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
70 CACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACAT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
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diff changeset
71 CACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
parents:
diff changeset
72 TTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTACAAA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
parents:
diff changeset
73 CTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTTCATCAAAGAAGTAACCTTCGCTATTA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
parents:
diff changeset
74 AAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATGAAACGACTCATCAGACCGCGTGCTTTCTTAGCGTA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
parents:
diff changeset
75 GAAGCTGATGATCTTAAATTTGCCGTTCTTCTCATCGAGGAACACCGGCTTGATAATCTCGGCATTCAATTTCTTCGGCT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
parents:
diff changeset
76 TCACCGATTTAAAATACTCATCTGACGCCAGATTAATCACCACATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTTG
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
parents:
diff changeset
77 TTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACGGATCCCCATTTCCAGACGATA
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
parents:
diff changeset
78 AGGCTGCATTAAATCGAGCGGGCGCAGTACGCCATACAAGCCGGAAAGCATTCGCAAATGCTGTTGGGCAAAATCGAAAT
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
parents:
diff changeset
79 CGTCTTCGCTGAAGGTTTCGGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCGCC
696d11a69c84 "planemo upload commit 01a4c6cb401a89acddd991825fcaa304052d275f"
iuc
parents:
diff changeset
80 GGCGTGAAATCTGGCTGCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTCGCTGATGCGCATCAGCGTGCT