Mercurial > repos > iuc > extract_metaphlan_database

diff macros.xml @ 5:b81c6e597cf1 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit 08ec37116aab4268fdb93f175b60e50a0bbfafb2
author iuc
date Mon, 27 Feb 2023 06:59:04 +0000
parents 6f88caeefd28
children 707ac779c25c
line wrap: on
line diff
--- a/macros.xml	Wed Feb 02 21:59:04 2022 +0000
+++ b/macros.xml	Mon Feb 27 06:59:04 2023 +0000
@@ -1,17 +1,16 @@
 <?xml version="1.0"?>
 <macros>
-    <token name="@TOOL_VERSION@">3.0.14</token>
+    <token name="@TOOL_VERSION@">4.0.5</token>
     <token name="@VERSION_SUFFIX@">0</token>
-    <token name="@PROFILE@">20.01</token>
+    <token name="@PROFILE@">22.05</token>
+    <!-- Metaphlan DB compatible with this version of Metaphlan
+    v4 introduced single genome level bins (SGB) and the index syntax differs from previous versions --> 
+    <token name="@IDX_VERSION@">SGB</token>
+    <token name="@IDX_DATA_TABLE@">metaphlan_database_versioned</token>
     <xml name="edam_ontology">
-        <edam_topics>
-            <edam_topic>topic_3174</edam_topic>
-            <edam_topic>topic_0194</edam_topic>
-        </edam_topics>
-        <edam_operations>
-            <edam_operation>operation_2478</edam_operation>
-            <edam_operation>operation_0324</edam_operation>
-        </edam_operations>
+    <xrefs>
+        <xref type="bio.tools">metaphlan</xref>
+    </xrefs>
     </xml>
     <xml name="requirements">
         <requirements>