Mercurial > repos > iuc > deseq2

comparison test-data/sailfish_quant_result2.tab @ 17:24930eeff731 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/deseq2 commit 23559e873291b04840f186edb0b4b85e76359e05
author iuc
date Thu, 03 Nov 2016 16:03:53 -0400
parents
children
comparison
equal deleted inserted replaced
16:a7bf54ecfa9d 17:24930eeff731
1 # sailfish (quasi-mapping-based) v0.7.6
2 # [ program ] => sailfish
3 # [ command ] => quant
4 # [ index ] => { ./index_dir }
5 # [ mates1 ] => { ./mate1.fastq }
6 # [ mates2 ] => { ./mate2.fastq }
7 # [ libType ] => { IU }
8 # [ output ] => { ./ }
9 # [ biasCorrect ] => { }
10 # [ threads ] => { 1 }
11 # [ fldMean ] => { 200 }
12 # [ fldSD ] => { 80 }
13 # [ maxReadOcc ] => { 200 }
14 # [ maxFragLen ] => { 1000 }
15 # [ txpAggregationKey ] => { gene_id }
16 # [ mapping rate ] => { 100% }
17 # Name Length TPM NumReads
18 NM_001168316 2283 1239.5 159.361
19 NM_174914 2385 11125 1505.04
20 NR_031764 1853 1025.5 100.595
21 NM_004503 1681 3619.8 320.806
22 NM_006897 1541 8224.3 660
23 NM_014212 2037 485.08 60
24 NM_014620 2300 4513.7 580.838
25 NM_017409 1959 433.19 45
26 NM_017410 2396 3219.5 40
27 NM_018953 1612 2616.3 220
28 NM_022658 2288 37883 4880
29 NM_153633 1666 4057.4 360.074
30 NM_153693 2072 643.57 70.2815
31 NM_173860 849 2521 960
32 NR_003084 1640 1000 10