Mercurial > repos > iuc > data_manager_star_index_builder

annotate tool_data_table_conf.xml.test @ 9:5750f6d0d369 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit a8e319862d723654c372a6d71e5de76e052586a9"
author iuc
date Wed, 05 Aug 2020 13:36:20 +0000
parents d2f4bfcf269a
children 66a8edd52132
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8
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
diff changeset
1 <tables>
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
diff changeset
2 <!-- Locations of all fasta files under genome directory -->
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
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3 <table name="all_fasta" comment_char="#">
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
diff changeset
4 <columns>value, dbkey, name, path</columns>
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
diff changeset
5 <file path="${__HERE__}/test-data/all_fasta.loc" />
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
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6 </table>
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
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7 <!-- Locations of STAR indexes -->
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
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8 <table name="rnastar_index2_versioned" comment_char="#" allow_duplicate_entries="False">
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
diff changeset
9 <columns>value, dbkey, name, path, with_gene_model, version</columns>
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
diff changeset
10 <file path="${__HERE__}/test-data/rnastar_index2_versioned.loc" />
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
diff changeset
11 </table>
d2f4bfcf269a "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
iuc
parents:
diff changeset
12 </tables>