Mercurial > repos > iuc > data_manager_semibin

annotate data_manager_conf.xml @ 0:12e956a2dbde draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
author iuc
date Fri, 14 Oct 2022 22:04:34 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
1 <?xml version="1.0"?>
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
2 <data_managers>
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
3 <data_manager tool_file="data_manager/data_manager_semibin.xml" id="data_manager_semibin" >
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
4 <data_table name="gtdb"> <!-- Defines a Data Table to be modified. -->
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
5 <output> <!-- Handle the output of the Data Manager Tool -->
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
6 <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
7 <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool -->
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
8 <column name="dbkey" /> <!-- columns that are going to be specified by the Data Manager Tool -->
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
9 <column name="path" output_ref="out_file" >
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
10 <move type="directory">
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
11 <source>${path}</source>
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">semibin/data/${dbkey}</target>
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
13 </move>
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/semibin/data/${dbkey}</value_translation>
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
15 <value_translation type="function">abspath</value_translation>
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
16 </column>
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
17 </output>
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
18 </data_table>
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
19 </data_manager>
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
20 </data_managers>
12e956a2dbde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_semibin commit aa9bfb2fb62547ee8bac34f0de5b3beaa0bfd1a4
iuc
parents:
diff changeset
21