Mercurial > repos > iuc > data_manager_manual
diff data_manager/data_manager_manual.xml @ 4:d17c507ec2f8 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_manual commit b775a4c6248f00430a9ab1b2a4e1afa255ac57a2"
| author | iuc |
|---|---|
| date | Wed, 16 Oct 2019 05:16:04 -0400 |
| parents | b35a1abdc8f8 |
| children | bfe6e9a80082 |
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--- a/data_manager/data_manager_manual.xml Wed Oct 16 03:19:09 2019 -0400 +++ b/data_manager/data_manager_manual.xml Wed Oct 16 05:16:04 2019 -0400 @@ -1,4 +1,4 @@ -<tool id="data_manager_manual" name="Manual Data Manager" version="0.0.1" tool_type="manage_data"> +<tool id="data_manager_manual" name="Manual Data Manager" version="0.0.2" tool_type="manage_data" profile_version="19.01"> <options sanitize="False" /> <description>Entry Builder</description> <command detect_errors="exit_code"><![CDATA[ @@ -10,22 +10,22 @@ <repeat name="data_tables" title="Data Table to define" min="1"> <param name="data_table_name" type="select" multiple="False" optional="False" label="Choose Desired Data Table" dynamic_options="galaxy_code_get_available_data_tables( __trans__ )" refresh_on_change="True"/> - <repeat name="columns" title="Table Columns" min="1"> - <param name="data_table_column_name" type="select" multiple="False" optional="False" label="Column Name" - dynamic_options="galaxy_code_get_available_data_table_columns( __trans__, data_table_name )" /> - <!-- <param name="data_table_column_name" type="text" label="Column Name"/> --> - <param name="data_table_column_value" type="text" label="Value to use for data table column"/> - <conditional name="is_path"> - <param name="is_path_selector" type="select" label="Value is a path"> - <option value="yes">Yes</option> - <option value="no" selected="True">No</option> - </param> - <when value="yes"> - <param name="abspath" type="boolean" label="Apply abspath" checked="True" truevalue="abspath" falsevalue="" /> - </when> - <when value="no"/> - </conditional> - </repeat> + <repeat name="columns" title="Table Columns" min="1"> + <param name="data_table_column_name" type="select" multiple="False" optional="False" label="Column Name" + dynamic_options="galaxy_code_get_available_data_table_columns( __trans__, data_table_name )" /> + <!-- <param name="data_table_column_name" type="text" label="Column Name"/> --> + <param name="data_table_column_value" type="text" label="Value to use for data table column"/> + <conditional name="is_path"> + <param name="is_path_selector" type="select" label="Value is a path"> + <option value="yes">Yes</option> + <option value="no" selected="True">No</option> + </param> + <when value="yes"> + <param name="abspath" type="boolean" label="Apply abspath" checked="True" truevalue="abspath" falsevalue="" /> + </when> + <when value="no"/> + </conditional> + </repeat> </repeat> <repeat name="directory_content" title="Directory Content"> <param name="subdir" type="text" label="Place in Subdirectory" value=""/> @@ -58,6 +58,24 @@ <data name="out_file" format="data_manager_json" dbkey="dbkey"/> </outputs> <tests> + <test> + <repeat name="data_tables"> + <param name="data_table_name" value="__dbkeys__"/> + <repeat name="columns"> + <param name="data_table_column_name" value="value"/> + <param name="data_table_column_value" value="dm6"/> + </repeat> + <repeat name="columns"> + <param name="data_table_column_name" value="name"/> + <param name="data_table_column_value" value="Drosophila melanogaster genome release 6"/> + </repeat> + <repeat name="columns"> + <param name="data_table_column_name" value="len_path"/> + <param name="data_table_column_value" value="dm6.len"/> + </repeat> + </repeat> + <output name="out_file" file="dm6.data_manager_json"/> + </test> </tests> <help> **What it does**