Mercurial > repos > iuc > data_manager_gtdbtk_database_installer
comparison data_manager/gtdbtk_database_installer.xml @ 1:f54abc2f5707 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit 196c4976945b02d23227836ae9cf70a9f44eed59
| author | iuc |
|---|---|
| date | Tue, 03 Jan 2023 09:04:59 +0000 |
| parents | 3221e031d107 |
| children | 9dcb593e8a43 |
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| 0:3221e031d107 | 1:f54abc2f5707 |
|---|---|
| 17 --out_file '$out_file' | 17 --out_file '$out_file' |
| 18 ]]> | 18 ]]> |
| 19 </command> | 19 </command> |
| 20 <inputs> | 20 <inputs> |
| 21 <param name="database_name" type="text" value="" label="Database name or description" help="This value will be displayed in the GTDB-Tk Database select list"/> | 21 <param name="database_name" type="text" value="" label="Database name or description" help="This value will be displayed in the GTDB-Tk Database select list"/> |
| 22 <param name="database_id" type="text" value="" label="Database id" help="This value must be unique with nNo whitespace allowed-use underscores"/> | 22 <param name="database_id" type="text" value="" label="Database id" help="This value must be unique with no whitespace allowed - use underscores"/> |
| 23 <param name="url" type="text" value="https://data.gtdb.ecogenomic.org/releases/latest/auxillary_files/gtdbtk_data.tar.gz" label="URL for downloading the selected version of the GTDB-Tk database"/> | 23 <param |
| 24 name="url" | |
| 25 type="text" | |
| 26 value="https://data.gtdb.ecogenomic.org/releases/release202/202.0/auxillary_files/gtdbtk_r202_data.tar.gz" | |
| 27 label="URL for GTDB release" | |
| 28 help="This should point to a GTDB release tarball. A table of available databases and their version compatability can be found at https://ecogenomics.github.io/GTDBTk/installing/index.html#gtdb-tk-reference-data." | |
| 29 /> | |
| 24 </inputs> | 30 </inputs> |
| 25 <outputs> | 31 <outputs> |
| 26 <data name="out_file" format="data_manager_json"/> | 32 <data name="out_file" format="data_manager_json"/> |
| 27 </outputs> | 33 </outputs> |
| 28 <tests> | 34 <tests> |