Mercurial > repos > iuc > data_manager_fetch_index_maf
comparison data_manager_conf.xml @ 0:dd56201af376 draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_index_maf commit 9c8e61ce03ebd67c2c852f5db4a62d19200c77fe"
| author | iuc |
|---|---|
| date | Thu, 25 Jun 2020 18:01:55 +0000 |
| parents | |
| children |
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| -1:000000000000 | 0:dd56201af376 |
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| 1 <?xml version="1.0"?> | |
| 2 <data_managers tool_path="tools"> | |
| 3 <data_manager tool_file="data_manager_fetch_index_maf/data_manager/data_manager_fetch_and_index_maf.xml" id="data_manager_fetch_and_index_maf"> | |
| 4 <data_table name="indexed_maf_files"> | |
| 5 <output> | |
| 6 <column name="name" /> | |
| 7 <column name="value" /> | |
| 8 <column name="indexed_for" /> | |
| 9 <column name="exists_in_maf" /> | |
| 10 <column name="path" output_ref="output" > | |
| 11 <move type="directory" relativize_symlinks="True"> | |
| 12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/align/${value}</target> | |
| 13 </move> | |
| 14 <value_translation>#echo ','.join([os.path.join($GALAXY_DATA_MANAGER_DATA_PATH, '%s' % dbkey, 'align', '%s' % $value, $filename) for filename in $path.split(',')])</value_translation> | |
| 15 <value_translation type="function">abspath</value_translation> | |
| 16 </column> | |
| 17 </output> | |
| 18 </data_table> | |
| 19 </data_manager> | |
| 20 </data_managers> |