Mercurial > repos > iuc > data_manager_dada2

comparison data_manager/dada2_fetcher.xml @ 5:658dbcc9d77d draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_dada2 commit fc58a4442c97181cd562761301dffdf6bbf575a5"
author iuc
date Tue, 03 Aug 2021 14:32:45 +0000
parents d17e5d13b86c
children 2e7c3f0f2c6d
comparison
equal deleted inserted replaced
4:739943802404 5:658dbcc9d77d
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool id="dada2_fetcher" name="dada2 data manager" tool_type="manage_data" version="0.0.7"> 2 <tool id="dada2_fetcher" name="dada2 data manager" tool_type="manage_data" version="0.0.8">
3 <requirements> 3 <requirements>
4 <requirement type="package" version="3.7">python</requirement> 4 <requirement type="package" version="3.7">python</requirement>
5 </requirements> 5 </requirements>
6 <description>Download reference databases</description> 6 <description>Download reference databases</description>
7 <command detect_errors="exit_code"><![CDATA[ 7 <command detect_errors="exit_code"><![CDATA[
25 <option value="silva_euk_18S">Silva Eukaryotic 18S</option> 25 <option value="silva_euk_18S">Silva Eukaryotic 18S</option>
26 <option value="PR2">Protist Ribosomal Reference database (PR2)</option> 26 <option value="PR2">Protist Ribosomal Reference database (PR2)</option>
27 </param> 27 </param>
28 <when value="silva"> 28 <when value="silva">
29 <param name="version_select" type="select" label="Database version"> 29 <param name="version_select" type="select" label="Database version">
30 <option value="138">138</option>
30 <option value="132">132</option> 31 <option value="132">132</option>
31 <option value="128">128</option> 32 <option value="128">128</option>
32 </param> 33 </param>
33 </when> 34 </when>
34 <when value="rdp"> 35 <when value="rdp">
77 </inputs> 78 </inputs>
78 <outputs> 79 <outputs>
79 <data name="out_file" format="data_manager_json" /> 80 <data name="out_file" format="data_manager_json" />
80 </outputs> 81 </outputs>
81 <tests> 82 <tests>
83 <test>
84 <param name="db_cond|db_select" value="silva"/>
85 <param name="db_cond|version_select" value="138"/>
86 <output name="out_file" file="silva138_json"/>
87 </test>
82 <test> 88 <test>
83 <param name="db_cond|db_select" value="silva"/> 89 <param name="db_cond|db_select" value="silva"/>
84 <param name="db_cond|version_select" value="132"/> 90 <param name="db_cond|version_select" value="132"/>
85 <output name="out_file" file="silva132_json"/> 91 <output name="out_file" file="silva132_json"/>
86 </test> 92 </test>