Mercurial > repos > iuc > data_manager_cat

comparison data_manager_conf.xml @ 0:3db8d67192d2 draft

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"planemo upload commit 4e5a8d7629d90c41219b48b648dd4ab675b84af0"
author iuc
date Mon, 09 Dec 2019 15:27:51 +0000
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-1:000000000000 0:3db8d67192d2
1 <?xml version="1.0"?>
2 <data_managers>
3 <data_manager tool_file="data_manager/data_manager_cat.xml" id="data_manager_cat" >
4 <data_table name="cat_database"> <!-- Defines a Data Table to be modified. -->
5 <output> <!-- Handle the output of the Data Manager Tool -->
6 <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
7 <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool -->
8 <column name="database_folder" output_ref="out_file" >
9 <move type="directory" relativize_symlinks="True">
10 <src>${database_folder}</src>
11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">CAT/${database_folder}</target>
12 </move>
13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/CAT/${database_folder}</value_translation>
14 <value_translation type="function">abspath</value_translation>
15 </column>
16 <column name="taxonomy_folder" output_ref="out_file" >
17 <move type="directory" relativize_symlinks="True">
18 <src>${taxonomy_folder}</src>
19 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">CAT/${taxonomy_folder}</target>
20 </move>
21 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/CAT/${taxonomy_folder}</value_translation>
22 <value_translation type="function">abspath</value_translation>
23 </column>
24 </output>
25 </data_table>
26 </data_manager>
27 </data_managers>