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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kma_index/ commit d0b3d69f25fe8419e5b98165ae53b59651d711b1
author iuc
date Fri, 10 Oct 2025 12:03:01 +0000
parents eb620aa70b61
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def26737cedb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kma_index/ commit d0b3d69f25fe8419e5b98165ae53b59651d711b1
iuc
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1 # This data table has records in the format
def26737cedb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kma_index/ commit d0b3d69f25fe8419e5b98165ae53b59651d711b1
iuc
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2 # value name path
def26737cedb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kma_index/ commit d0b3d69f25fe8419e5b98165ae53b59651d711b1
iuc
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3 # where paths point to folders with kma index files but include the common prefix (always index) of these files.
def26737cedb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kma_index/ commit d0b3d69f25fe8419e5b98165ae53b59651d711b1
iuc
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4 # A record could look like this:
def26737cedb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kma_index/ commit d0b3d69f25fe8419e5b98165ae53b59651d711b1
iuc
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5 # 2025-10-10_abbf9e73ffdc7e46450db9781b23e605 an_example_index /tool-data/kma_index/2025-10-10_abbf9e73ffdc7e46450db9781b23e605/index
def26737cedb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kma_index/ commit d0b3d69f25fe8419e5b98165ae53b59651d711b1
iuc
parents: 0
diff changeset
6 # with the following files inside /tool-data/kma_index/2025-10-10_abbf9e73ffdc7e46450db9781b23e605/:
def26737cedb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kma_index/ commit d0b3d69f25fe8419e5b98165ae53b59651d711b1
iuc
parents: 0
diff changeset
7 # index.comp.b index.length.b index.name index.seq.b
def26737cedb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kma_index/ commit d0b3d69f25fe8419e5b98165ae53b59651d711b1
iuc
parents: 0
diff changeset
8 # The entire recorded path (including the /index) can be passed to kma unaltered and it will discover the index files from it.