Mercurial > repos > iuc > data_manager_bowtie_index_builder

diff data_manager/bowtie_index_builder.py @ 1:de991e82646a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie_index_builder commit e31f6e2900ebbde6f3679882994c761209aeb9e2-dirty
author iuc
date Thu, 15 Sep 2016 03:15:54 -0400
parents ddd44c79a065
children ddd473181942
line wrap: on
line diff
--- a/data_manager/bowtie_index_builder.py	Thu Sep 15 03:13:57 2016 -0400
+++ b/data_manager/bowtie_index_builder.py	Thu Sep 15 03:15:54 2016 -0400
@@ -32,7 +32,7 @@
     os.symlink( fasta_filename, sym_linked_fasta_filename )
     args = [ 'bowtie-build' ]
     if color_space:
-        args.append( '-c' )
+        args.append( '-C' )
     args.append( sym_linked_fasta_filename)
     args.append( fasta_base_name )
     args.append( sym_linked_fasta_filename )