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comparison macros.xml @ 9:3db2d0b07f52 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dada2 commit bbbc0e71b1db299a7c7296f25ac7adcccd27fbe3
author iuc
date Tue, 11 Feb 2025 23:24:04 +0000
parents 55fef9dcb883
children 3a73559d29d4
comparison
equal deleted inserted replaced
8:55fef9dcb883 9:3db2d0b07f52
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <macros> 2 <macros>
3 <xml name="requirements"> 3 <xml name="requirements">
4 <requirements> 4 <requirements>
5 <requirement type="package" version="@DADA2_VERSION@">bioconductor-dada2</requirement> 5 <requirement type="package" version="@TOOL_VERSION@">bioconductor-dada2</requirement>
6 <yield/> 6 <yield/>
7 </requirements> 7 </requirements>
8 </xml> 8 </xml>
9 <xml name="bio_tools"> 9 <xml name="bio_tools">
10 <xrefs> 10 <xrefs>
11 <xref type="bio.tools">dada2</xref> 11 <xref type="bio.tools">dada2</xref>
12 <xref type="bioconductor">dada2</xref> 12 <xref type="bioconductor">dada2</xref>
13 </xrefs> 13 </xrefs>
14 </xml> 14 </xml>
15 <token name="@DADA2_VERSION@">1.30.0</token> 15 <token name="@PROFILE@">23.2</token>
16 <token name="@WRAPPER_VERSION@">0</token> 16 <token name="@TOOL_VERSION@">1.34.0</token>
17 <token name="@VERSION_SUFFIX@">0</token>
17 18
18 <xml name="version_command"> 19 <xml name="version_command">
19 <version_command><![CDATA[ 20 <version_command><![CDATA[
20 echo $(R --version | grep version | grep -v GNU)", dada2 version" $(R --vanilla --slave -e "library(dada2); cat(sessionInfo()\$otherPkgs\$dada2\$Version)" 2> /dev/null | grep -v -i "WARNING: ") 21 echo $(R --version | grep version | grep -v GNU)", dada2 version" $(R --vanilla --slave -e "library(dada2); cat(sessionInfo()\$otherPkgs\$dada2\$Version)" 2> /dev/null | grep -v -i "WARNING: ")
21 ]]></version_command> 22 ]]></version_command>